Arthrobacter sp. LS16: AFL94_15555
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Entry
AFL94_15555 CDS
T04078
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
arl
Arthrobacter sp. LS16
Pathway
arl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
arl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AFL94_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arl03400
]
AFL94_15555
DNA repair and recombination proteins [BR:
arl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AFL94_15555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF3017
Motif
Other DBs
NCBI-ProteinID:
ALD65104
LinkDB
All DBs
Position
complement(3356789..3357751)
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AA seq
320 aa
AA seq
DB search
MRAIWTGSIAFGLVNVPVKAYGATEDHDISLHQVHSADGGRIKYERRCEICGKKIKYKDI
DKAYDDGERTVVLTGEDMDALPAERSREIEVVQFIPADQLDPLMLEKSYYLQPDSKSPKA
YELLRRTLEDTDKLAVVRFALRQKTRLGVLRVRSKAMVLQSIMWADELRDAGFAEPENTA
RISAQELKMSATLVESYSGDFTPEDFSDDYQIQLQQLIDAKIEQGEDLDTEATFGAASSQ
DGEEGVLDLMEALKRSIAGSGKSAGKGSAGKPSGRASRTRTPKKATGSSSKAGKSGTAKK
KKASSSASKKKASSDSEKSA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagagctatatggactggatcaatcgccttcgggctggtcaatgtaccggtgaaagcc
tacggcgcgaccgaggatcacgacatttcgctgcaccaggtccactccgcagacggcggc
cggatcaaatacgaacgccgctgcgagatctgcggcaagaagatcaaatacaaggacatc
gacaaggcctacgatgacggcgagcgcaccgtggtgctgacgggcgaagatatggacgca
ttgcccgcggagagaagccgcgagatcgaggtagtgcagttcatcccggctgaccaattg
gacccgctgatgctggagaaaagctactatctccagcccgattccaaatcgcccaaagcc
tatgagctcctgcggcggaccttggaggataccgacaagttggccgtggtgcgtttcgcc
ttgcgccagaagacccggctgggcgtgctgcgggtgcggtcgaaggccatggtgctccag
tcgatcatgtgggccgatgaattgcgggatgccgggtttgccgaaccggagaacaccgcc
cggatcagcgcgcaggagttgaagatgtccgccacgctggtggaatcctacagcggggac
ttcacgcccgaggacttcagcgacgactaccagatccagctgcagcagctgatcgatgcc
aaaatcgagcagggtgaagaccttgataccgaagcgactttcggagcggcctcctcgcag
gatggcgaggaaggtgtccttgatttgatggaagcgctcaagcgtagcattgcaggcagc
gggaagtccgccggcaagggatctgcgggcaagccatccgggcgtgcttccaggaccagg
acacccaagaaagccacgggttcctccagcaaagccgggaaatccgggacggcgaaaaag
aagaaagcctcctcctcggcaagcaagaagaaggcttcctcggactccgagaagtccgcc
tga
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