Athalia rosae (coleseed sawfly): 105685821
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Entry
105685821 CDS
T09776
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105685821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105685821
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105685821
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105685821
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105685821
BRITE hierarchy
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
105685821
NCBI-ProteinID:
XP_012255675
EnsemblRapid:
ENSAEAG00005001819
LinkDB
All DBs
Position
2:complement(28578053..28579728)
Genome browser
AA seq
292 aa
AA seq
DB search
MECMVANVEHMRFDIEIALDEQYGALSLPFTGMDKSIAAVCQFYPRGTCVKGGSCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPDGSICKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDIREAQARQELEGGGPGAHPPHHHMNSHSGPPP
RGPQKPLEEVTCYKCGTKGHYANKCPKGHLAFLSHTGGGAAAGAGQNPSYRR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcatggtggctaatgtcgagcacatgagatttgacattgaaattgccttggac
gaacaatatggtgctttatcgttgcccttcacggggatggataaatccattgccgcagtt
tgccagttttacccacgaggaacctgtgtcaagggaggttcttgcccatttaggcatgtc
agaggagacagaacgatcgtttgcaagcattggcttcgtggtctttgcaaaaagggagac
cagtgtgaattccttcacgaatatgacatgacaaaaatgccagaatgctacttctactcc
cgatttaatgcatgccacaacaaagagtgtcctttcctccacatagaccctgaaacaaaa
gttcgagattgtccatggtatgatcgtggattttgcagacatggaccactctgtaggcat
agacacgttcgcagagttttatgcatggcatatctcgcaggattttgtcctgacggatct
atctgtaaattcatgcaccccaggtttgagcttccagccgtccaagatatgcagccaaag
gagggtaagaaagtaatgataacttgtcatttctgtggcgaagggggtcacaaggcaatt
tattgtaacaaaatgccaccggatattcgagaggcgcaagcaaggcaggaattggagggt
ggggggcctggagcgcaccctccacatcaccacatgaactcacatagtgggcccccgcca
cgagggccacaaaaacctttggaagaagttacgtgttataaatgtggaacaaaaggtcat
tatgcgaataaatgtccgaaaggacatctcgcattcctgagtcacaccggaggaggagcc
gcggccggtgctggtcaaaatcctagctacagacgataa
DBGET
integrated database retrieval system
