Athalia rosae (coleseed sawfly): 105686675
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Entry
105686675 CDS
T09776
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105686675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105686675
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105686675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_2
TPR_17
TPR_14
TPR_1
TPR_CcmH_CycH
CFAP70_TPR_C
TPR_8
TPR_11
TPR_12
TPR_7
ANAPC3
ARM_TT21_C
RMD1-3
TPR_9
CFAP70_mid_TPR
ChAPs
TTC22_N
CABIN1_N
TPR_15
DUF7017
T7SS_EccA1_N
HrpB1_HrpK
ARM_TT21
BTAD
YwmA
HEAT_Nup120
HTH_TGH
Motif
Other DBs
NCBI-GeneID:
105686675
NCBI-ProteinID:
XP_012257142
LinkDB
All DBs
Position
3
Genome browser
AA seq
1308 aa
AA seq
DB search
MSKASKASLKEARDLINQKEYKVAIRICKNVLKEDKSNYVALVLLGAAMQEVEELRSQAP
LALKKATELQPNNIVAWRGLVTFYERDPSNPAALLELITASSKLLELHGELEKFSSTSIK
IVDYTLQLKNDTAVADVVSTFQHLREISSEDRKKVINLSLARILTEYPQDLKEYSGLLEA
TLAAVCKDLNIPNRQEYYKKYLKILYKAGKADVLLTEAARMHEQFSDDTSSLEWICRLYS
ENSLSNGSCNGIEITPFYEALLALNTESSMAAMAKGVDLCQKDQLIESRDILNKVALVKP
NWLYPWLALAEVNLKLYCFEETERNALRAEQLMTLQTSDKLQHRVKLILIEAMVKSSNSN
QVKAAIKKCEEQMTSEDSSTKIELLLARAYIYLQDPKAESLLDKLDSEPETKVEATVLRA
IGLKNSQKLEEAADFLGSALESSEAWLILGKIHWEIRDYSHSLMAFLKSIHADRYNWECL
VYLGHYYQRHGNDPEKSQRCYSKALQINPDSKEAGIGLSTAYRLLKNSEANMQLLQGVTM
YGSGPKWAWLQLGLHYLDQDEPEQAVRSLRNAIRSDPNDNICWEILADAYLEKGAHTSAL
KSYQRALELSPGSVYSMIQIANIKLMLGQFLEAKVDFESVLLREQHYLPALKGLAETLLA
LSDEHGKKQLLCRSRENAQSAIDHLTTAITVESNFSCLWKLLGDACYKISHLPLKYAFLK
VASGLVKAETPEPYVTIDRADVFALSVRSYCRALSLSPDSALLWHDLASSYLAQLRLSAT
ERSYEIAEKAEAAAKQAIRLAPSSWRHWNLLGVICMTKEIKNYALSQHCYVMAIDMEPQN
AIAWTNLGTLYLHLDDSYRANEAFARAQRADPGYINCWIGQAFIAEKVRQKEAMDLFRHT
TQLGYRDQAALGYAHWVLTTLLDPEAKKDPLYTYAIENMHAVTVATDGMSWYVEHVPDDP
CALNAYGLLLERQKLYNPAGRVFSKALKLVTKDNERDALQVNLSRILIKLNNFDKAVELC
QTIKNADFNSHCQLAISLFKAERYEESYGAYEAALEWLATGGSDKAHVLCAMAAIAYMFQ
GADAAKTLLFQCIQMQPPIVSGLLAAAALGLIQQDLNLTTLVLNELKVYKDHKEHRSDIT
FLTAYLHILRNDPKSAIRVLSKGVHRHPDDVQSWVFLVRFLFESSPDIAGNCAEKALLLG
RKDCSDIVAEVVCTSSISRLVSGQGKEGLRLAQKTVHSFPYMAQSWATMIAGLLPRCNAV
DSSPSAHWLTVLISIVRRYFPTTRRMTQWLSNSERKASLIADKVAALR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggcatcaaaagcaagtttaaaagaagctcgggacttgataaatcaaaaggaa
tacaaagtagcaataaggatatgcaaaaatgttttgaaggaggataagagtaattatgta
gctctggtcttacttggcgcagctatgcaggaagtggaagagttgagatctcaagctccg
ctagctcttaagaaagctaccgagcttcagccaaataatattgtggcgtggcgaggatta
gtcacgttctatgaacgtgacccaagtaatcctgctgcgttgctagaattaattactgca
agcagtaaactcttggagcttcatggggaactggaaaaattctcaagtacatcaattaaa
attgttgattatacactgcaattaaaaaatgatacagcagtggcagatgttgtatcaaca
tttcagcacctacgagaaatatcgagcgaagataggaaaaaagtaatcaatttaagcttg
gcaagaatcttaaccgaatatcctcaggatctgaaagaatattccggtctgctagaagcg
actcttgccgcggtgtgcaaagatctaaatattcccaatagacaagaatattataaaaaa
tacctgaagattctctataaggctggcaaagcagatgttttacttacggaagctgccaga
atgcacgaacaattttctgacgatacttcttcgttagagtggatctgccgattatattca
gaaaacagtttatcaaatgggtcttgcaatggtatagaaataacaccattctacgaagca
cttttagctctaaatacagagtctagtatggcagcaatggctaaaggggtggatttgtgc
caaaaagatcaattaattgaatctagagacattttaaataaagttgctcttgtgaaacca
aactggttgtacccttggttagctttggctgaagttaatctgaagttgtactgctttgag
gaaactgagagaaatgcacttcgggctgaacaattgatgacacttcaaacatcagataaa
ttacagcatagggtaaaacttatattaattgaagccatggtcaagagttctaactcgaat
caagtaaaggctgctatcaaaaagtgtgaagaacagatgacaagtgaagattcttcaacg
aagatagaattactcttggcaagagcatatatttatctgcaagatccaaaggcagaaagt
ttattggacaaactagacagcgagccagaaacaaaggttgaggctaccgttctcagagca
attggtctgaaaaattcacagaagttagaggaagccgcagattttcttggctcagcattg
gagagctctgaggcatggctaattttggggaaaatacattgggaaatcagagattatagc
cacagtttgatggcatttttaaaaagtattcatgccgatcgctacaactgggaatgccta
gtttatttaggtcactattatcaacgtcatgggaatgatccagaaaagtctcagcggtgc
tattcaaaagctttgcagattaatccagattccaaagaagcaggcatcggtctcagtaca
gcttacaggctcctgaagaacagcgaagcaaacatgcaactgctgcagggagtcacgatg
tatggcagtggacccaagtgggcttggctccaattaggtctgcattatttggaccaggac
gaacctgagcaggctgtacgttcgctacgtaatgctatcagaagcgatccaaatgacaat
atctgttgggagattttagctgatgcatatctagagaaaggagctcacacatcagctttg
aaatcgtatcagcgtgccctggaattgtctcctggatctgtttattctatgatacagata
gcgaacatcaaattgatgcttggccagtttttagaagcgaaagtagattttgaatcagtc
cttctgcgagaacaacactatcttccggcgcttaaaggactcgcggaaacgttgcttgcc
ttgtctgacgaacatggaaaaaaacaattactgtgccggtctagggaaaacgctcaatca
gccatagatcatttaaccacagcaataacggtggaaagcaatttctcttgtctttggaaa
ttgctgggtgacgcttgttacaaaatatcacatctaccgttgaaatatgcttttctaaaa
gttgcaagcggcctggttaaagctgagactccagagccatacgtgaccatcgatagggca
gatgtattcgcactatccgtaagatcatattgccgtgcgttgagtttatctccagactct
gcgctgctctggcatgatttagcgtcgagttatttggcgcagttacggttaagtgcgaca
gaacgttcctacgagattgctgaaaaagcagaggcagccgctaagcaggctatacggctt
gccccatcctcgtggcgccattggaatctcttgggagttatttgcatgacgaaagaaata
aaaaattacgctctttcgcagcattgttacgtgatggcgatcgatatggaaccgcagaac
gccattgcgtggaccaacttgggaaccttgtacctacatttagatgattcttacagagca
aacgaagctttcgcccgggcccaacgggctgatcctggatacattaactgttggataggt
caggcattcattgcggaaaaagttcgtcaaaaagaggcaatggatttgttcaggcacaca
acgcagttaggatatcgcgaccaggctgcattgggttacgctcattgggttttaacaacg
cttttagaccccgaagctaaaaaggacccgttatacacgtatgcaatagaaaatatgcat
gcagtaactgtggcaacagatggaatgagttggtacgtcgagcatgtgccggatgatccc
tgtgcgttgaatgcttatggtttattgttggagcgtcaaaaactgtacaatccggcagga
cgagtattttccaaggctttgaaactggtcaccaaagacaatgagcgagacgcgttgcaa
gtgaatttgtcccggattttgattaagctaaacaatttcgacaaagctgttgaactttgc
cagacgataaagaatgctgatttcaattcccattgccaactcgccatttcgttattcaaa
gccgaaagatacgaggagtcatacggtgcttacgaagcagcgttggagtggctagcaacc
ggtggttcggataaagctcatgtactttgtgcgatggctgccatcgcgtacatgttccaa
ggtgctgacgctgccaaaacgttactcttccaatgcattcaaatgcaaccacctatcgta
tctggtctcctggccgcagctgcgcttgggttgatacagcaggatttgaatttgacaact
ttagttctcaatgaattgaaggtgtataaagatcataaggaacacagaagtgatattacg
tttctcaccgcgtatctgcacattttacgaaacgatcccaagagcgcaatcagagtgttg
agcaaaggcgttcacagacatcctgacgacgtacaatcttgggtattcctggtaagattc
ctgttcgaatcatcgccagatattgctggtaattgtgccgagaaagctttattactggga
cgcaaagattgcagcgatattgtagcagaagtagtttgcacgtcgtctataagtcgactt
gtttctggccagggaaaggaaggattgaggttagcgcaaaaaacagtacactcgttccct
tacatggctcaaagttgggctactatgattgcaggacttctaccaagatgcaatgccgtg
gattcttctccaagcgctcattggcttacagtgctcatttccattgtacgacgttacttt
ccaacaaccagacgtatgacacaatggctttctaatagcgaacgaaaagctagtctgatt
gctgacaaagttgcagcattacgatga
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