Athalia rosae (coleseed sawfly): 105689657
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Entry
105689657 CDS
T09776
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105689657
03015 mRNA surveillance pathway
105689657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105689657
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105689657
mRNA cycle factors
P-body specific factors
105689657
BRITE hierarchy
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105689657
NCBI-ProteinID:
XP_012262251
EnsemblRapid:
ENSAEAG00005006437
LinkDB
All DBs
Position
7:14925977..14930511
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AA seq
622 aa
AA seq
DB search
MTEETQPEVSPPTDSQSSTPDTVNKAKDNKKDKCRPMTKVVIRRLPPSMTQEQFVEQISP
LPDHDYMYFVKADMSLGQFAFSRAYINFVDQQDIFIFREKFDNYVFVDAKGTEYPAVVEF
APFQRLPKKRVGKKKDQKCGTLKTDPYYLSFLESLKNQEAESGLSQPKTEYSYQPSDGSS
KKVTTTPLLEFLKQRKQEKQRLRDEKREERRRRDLERRRAKDELTISKVLKNPDLGKDTN
KESKEAKDDKDKVLPKEGKSRNRKEEKLRDKTARDRDSKVPGKNFKDKEAKHQRRNEEKK
GYVRKEEREISKEDKKTDGKEERKNETREDDREIKDKKVEEKRGKSYEKMRQEKKRLAEA
KRQSVEFGSEPVNTGKVKKEERESFSKRDRRSEGNVAGSRAERIQILKDDVKKKDEKTKI
KPEPEPESIDFNEELSETCDNNIQSELHDNDVGGSVSPDDNLVESGKSKSSDHIDSESNY
ATDLSMKGETKLMKRRNSLESGGEGGGGDGATLRRHKSLDGGERCGFKKDRNHDKEKSKK
DPRQERRIRNKDRPAMEIYRPGMGRFSKQRLEREKSNNDERASLSQSPTPSPVPSVVGKP
SKPAASELRSMTFKRSLSRDLP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaaacacagcccgaagtttctccacctacagattctcagtcaagtacacca
gatactgtcaataaggctaaagataataaaaaagacaaatgtcgcccaatgaccaaagtt
gtaattcgtcgcttaccaccctcaatgacccaggagcaattcgtcgagcagatctcccca
cttcccgaccacgactacatgtactttgtgaaggcagacatgtcgctgggacaatttgca
ttctctcgtgcctatataaattttgttgaccagcaagacatattcatattcagagaaaag
tttgataattacgtatttgtcgatgctaagggtaccgagtatccagcagttgtggagttt
gctcctttccagagactccctaagaaaagagtcggtaaaaaaaaggatcagaaatgtggc
accctgaagaccgacccttactatcttagctttctagagagtctcaagaaccaagaggca
gaatcaggattaagtcagcctaaaaccgaatattcctatcaaccctccgacggttcatcc
aagaaagttacaacaactccgcttttagaattcttaaaacagcgtaaacaagaaaagcaa
aggctacgggatgaaaaacgagaagaaaggcgtcgtcgcgatttggaaaggcggcgagcc
aaagacgaactaaccatatccaaggtattgaaaaacccagatcttggcaaggatactaac
aaggaatcaaaggaggcaaaagatgataaggataaagttttacctaaggagggtaaaagt
cgtaataggaaagaggagaaattgcgtgacaagacggcgcgagatagggattccaaggtt
ccaggaaaaaatttcaaggataaagaagcaaagcatcaacgaagaaatgaagagaagaaa
ggatatgtccgtaaagaggaaagagaaatttcaaaggaagataaaaaaactgacggcaaa
gaagagcggaaaaatgaaaccagagaagatgatagagaaataaaggataagaaagtggaa
gaaaaacgaggtaaaagctatgagaaaatgagacaggaaaaaaagagattggctgaagca
aaacgacaaagtgtcgaatttggatcagagcctgtcaataccggtaaagtaaaaaaagag
gagcgcgaatcattttcaaaaagagacagaagatccgagggcaacgtagctggatcgagg
gcggaaagaattcaaattctgaaagatgatgtaaagaaaaaagatgagaagacgaaaatt
aaacctgaaccagaacccgaatctatagacttcaacgaagagttaagcgaaacctgcgat
aacaatatccaaagtgaactccacgataatgacgtggggggttcagtttccccagacgat
aatctcgtggaatcgggtaaatcaaaatcaagcgatcacattgactctgagagtaattat
gcgacagacttaagcatgaaaggtgaaacaaagctcatgaaaagacgtaattctttggaa
agtggtggcgaagggggtggtggtgatggcgcaacccttagacgacacaaatcattggac
ggaggtgaacgatgtggttttaagaaggatagaaatcacgataaggaaaagtcaaagaaa
gatccaaggcaggaacgtaggatcagaaacaaggatcgtccagcaatggagatctacaga
cccggtatggggaggtttagcaaacagcggttggagcgcgaaaagtctaataatgacgaa
cgtgcttccctctcgcagagcccaactcctagtccggtaccttcggttgttggaaagcca
agcaaaccagcggcttctgaacttcgttcaatgacttttaagcgtagcttaagccgcgat
cttccttag
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