Athalia rosae (coleseed sawfly): 105693011
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Entry
105693011 CDS
T09776
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105693011
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105693011
3'-5' decay
Other 3'-5' decay factors
105693011
BRITE hierarchy
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
UvrD-helicase
PAM2
PhoH
AAA_22
Motif
Other DBs
NCBI-GeneID:
105693011
NCBI-ProteinID:
XP_012268061
EnsemblRapid:
ENSAEAG00005002347
LinkDB
All DBs
Position
6:complement(6076967..6082200)
Genome browser
AA seq
924 aa
AA seq
DB search
MISSPCKCDEVMFVQNILPNFSKIVETKWFTSDNPESVMSSSLEDVVAFVDSQLHLKFCS
KNVKHTWTFEVLTTGKSLENVSLMLENHREHFTIVSVTSLEGSEGLYTGQEWFKASAALP
GLDLNQPSSTRYKITIGFKTDRYGTYRQTVIFGFGGYPVLFGQISADCIPIDDLPRLEEA
RRIILSQNARKWTKNNTHIVAFESPFVPARDIKEVNLTKAYPFPDETNFHLTHDTLTEES
LTPTNYRGRMHELVAIEELARHEQVARYNIVTQIRLCQYYIVAPDADCATTAKYAPSGEL
FAQLPLGREISEDSKSGRLLLRGCSKVLFKPIGWERSDNNQRQIVFEAHIEDKCNRIIYL
RLSKNCIETLQLRPEIDVTVQVQFQLNRLPYCEWHRSIDRVIDTSLIFPVITEDTTIPWN
SVEYWSAQFDQKLNAKQQQAVIAMIAPINMILPPILLVGPFGTGKTYTLAQGIRMILNKG
PKHKVLLCTHSNSAADLYVKDFFDAWYKESMDTRLKPLRIYYKGRFRNTVHPVVQEYCLM
DENGRFREPTKDDILRCGLIIATLATSSCLASLDAGLTHIIIDEAAQAMECEALTALTLA
RSTTRLILAGDQMQLAPELYSDLASERGLGLSLLERICNLYPPLFPCKILLCQNYRAHST
IIGLTSELFYSGQVVGCGKHLAHPIFTPLTFFSVQGQDVQGMHSTGFYNDAEAFEVTDRI
AELKSRWPTEQWGPYGEGAIGVVAHYAEQVSRIRMELRKRKLFDISVERVMNVQGKQFRA
VFISTVRTRNSCQYSTDANIKDYGFLSNPRLLNTSITRAKCLVAIIGDPVALLTIGSCQR
VWEKFFSVATLYGIDYVTLRRYVDNLSQTPVSAPLNPLAKEFVPRSPQPPYQVEYVPIPV
PYPVIYCNSINNNNNNNNNSSSSN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgattagttcaccgtgcaagtgcgacgaggttatgttcgtgcagaatatattaccgaac
ttctcaaagattgttgagacgaaatggtttacatcggacaatccggagtccgttatgtcg
agttcccttgaagacgttgtggcatttgtagactcgcaattgcacctcaaattctgttca
aaaaacgtgaagcacacctggacgtttgaggtactgaccacagggaagtctttggagaac
gtatccctgatgttagaaaatcacagggaacatttcaccatagtatcggtaactagtttg
gaaggtagcgagggcttgtacaccggacaagaatggttcaaagcatctgcggcattgcca
ggcttggatttgaaccaacctagtagcacccgatacaaaataaccataggtttcaagaca
gatcgttacgggacctacagacaaaccgttatctttggttttggcggttatccagttctg
tttgggcagatatctgcagattgtatcccaattgatgatttaccgagacttgaggaggcg
cgccgcataatactgagtcagaatgcaagaaaatggacgaagaataacacgcacatcgta
gcctttgaatctccctttgttcccgctagagatataaaagaggttaatttaacgaaagcc
tatccttttcctgacgaaactaactttcatctcacccacgatacactcactgaagaatct
ctgacacccacaaactatcgcggtcgcatgcatgagcttgttgccattgaggaactagcg
agacacgaacaagtcgctaggtacaatattgtcacgcagatcagactctgccagtattac
atcgtcgcgccagatgccgactgtgctaccacagccaagtatgccccttctggagaatta
tttgctcagctaccactgggacgagaaatttctgaagattctaagagcgggcggttgttg
ctaaggggttgcagtaaagttctgttcaagcctatcggctgggagagaagtgataataat
cagcgacaaatagtgttcgaggctcatatcgaggataaatgtaatcgaataatttacttg
cggttatctaagaattgcatagaaacacttcagctgcggcccgaaatagatgtaactgtc
caagtgcaattccaactgaatcgactaccttattgcgagtggcatagatctatagaccgt
gtaattgacacaagtttgatttttcctgtgatcactgaagacacgactataccatggaat
tctgtagagtactggagtgcgcagttcgatcaaaagctaaacgcaaaacaacagcaggca
gttattgctatgattgcccctatcaacatgattttgcctccgattctccttgttggaccc
ttcggcactggcaaaacttatactctcgcacaaggaatacgcatgattctcaacaaaggg
cctaaacacaaggtcttactttgtacacatagcaacagcgctgctgatttatatgttaag
gacttctttgacgcgtggtacaaagaatctatggacaccagacttaaacctctacgaatc
tactacaaggggcgatttagaaacacggtacacccggtagtgcaagaatattgtctcatg
gatgaaaatggtcgatttcgagagcctacaaaggatgatatcttgcgctgtggtttgata
atcgcaactttggcaacatctagctgcttagcaagtctggatgctggactcactcacatc
ataatagacgaagctgcccaggcaatggagtgcgaggctctgactgctctcacgcttgca
agaagcacaactcgtttgatattagccggtgatcaaatgcaattggctcccgaattatac
agtgatcttgctagcgaacgagggctaggtctgagccttctagagagaatctgcaatctg
tatccaccactctttccgtgcaaaattctgctctgtcagaactacagagctcattcaacc
atcataggactaacttcagaattattttattccggccaagtcgttggatgtggcaaacac
ttggcacatcctatcttcaccccgttgaccttcttcagcgttcaagggcaagatgttcag
ggcatgcattcaactggattctacaacgacgctgaggcctttgaggtaacggaccgaata
gcggaattgaagagtcgttggcctacggagcagtggggaccatatggcgagggggcgatc
ggagtggtagcccactacgcagaacaggtgtcaaggatccgtatggagctgcgaaaacgt
aagctgtttgatatatcagtggagcgagtgatgaatgttcagggaaagcagtttagagct
gttttcataagcactgttaggacacgaaatagttgtcaatattcaacggatgccaacata
aaagactatggctttttgagtaatccaagactgttgaatacttctataacccgtgcaaag
tgtctagtagcgattattggggatccagtggctctcctgacaattggatcttgtcaaaga
gtttgggaaaagtttttctccgttgcaacattatacggtatagattacgtcactcttaga
aggtacgtcgacaatttatcacaaacaccagtctctgcaccactaaatccattagcaaaa
gaattcgtgcctagaagcccacagcctccttatcaagtggaatatgtaccaatcccggtg
ccgtatccagtgatatattgtaactcgattaataataataataacaataataataatagt
agtagtagtaattag
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