Amycolatopsis roodepoortensis: NQK81_08085
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Entry
NQK81_08085 CDS
T08507
Name
(GenBank) AAA family ATPase
Organism
aroo
Amycolatopsis roodepoortensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
Viral_helicase1
UvrD-helicase
UvrD_C_2
PhoH
UvrD_C
AAA_11
AAA_30
SLFN-g3_helicase
DEAD
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UUV33400
LinkDB
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Position
complement(1780563..1782818)
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AA seq
751 aa
AA seq
DB search
MSPDRELDALEQDVALEQQYVTTLYRKLDAERADAQRRLDETLRQTGGTPQARTERDVAT
TLYTDRLAQLSSVEQGLCFGRLDFLPDHAEETTYIGRLGLFDEDDDYRPLLVDWRAPVAR
PFYLATAASPEGVRRRRHIRSLSRKVVGVDDEILDLSAADQGQDLGLAGEAALLAALERR
RTGEMSDIVATIQAEQDRIIRASPNGVLVVQGGPGTGKTAVALHRAAYLLYTHRQQLTTR
GVLVVGPNSTFLRYIGQVLPSLGETGVLLATIGQLYPGLDADGPVTREAAEIKGRPVMAD
VLANAVRDRQRVPEPVLEIEFEREILMLDRKTCTEARTRARRSRRPHNLARRIFVSDLLD
ALTRQAAKKLGEDLLDARDVQDIRAEVSADKNVAAAINGLWPKLTPEIVLDELFADRERL
RSAAGKALSDTDREHLYSPTDAKWSPSDVPLLDELAELLGEDDTEARAEAARREREDRAY
AEGVLDILEQDEEIVDEELLRVGDVLDAELFAERQQRRGEMTAAQRAAQDRTWTFGHVIV
DEAQELTAMDWRLLMRRSPNRSMTLVGDVAQTGAAGGARTWGEALSPYVADRWRLEELTV
NYRTPAEIMAVASRVLAEVNPELEAPVSVRETGFEPWLRSVDPADLAAELPGIVDAELSA
VDGGTVAVLCPPPLVASLSETLGEAGDRVSVMPVERAKGLEFDSVLLVAPDEVVARSPRG
LNDLYVALTRATRRMGVVQTGDLVPALEGLG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccggaccgggaactcgacgcgctcgagcaggacgtcgcgctcgagcagcagtac
gtcaccaccctctaccgcaagctcgacgccgaacgcgccgacgcgcagcgcaggctcgac
gagacgctgcgccagaccggcggcaccccgcaggcgcgcaccgaacgcgacgtcgccacg
acgctgtacaccgacaggctggcccagctgagctccgtcgagcagggcctgtgcttcggc
cgcctcgatttccttccggaccacgccgaggagaccacctacatcgggcggctcgggctg
ttcgacgaggacgacgactaccgcccgctgctcgtcgactggcgcgcgccggtcgcgcgg
cccttctacctcgccaccgccgcttcacccgaaggtgtgcggcggcgccgccacatccgg
tcgctgagccggaaggtcgtcggcgtcgacgacgagatcctcgacctctccgccgccgac
cagggccaagacctcgggctcgcgggcgaggcggcgctgctggccgcgctcgaacgccgt
cgcaccggcgagatgagcgacatcgtcgccaccatccaggccgaacaggaccgcatcatc
cgcgcgtcgccgaacggtgtcctggtggtccagggcggccccggaaccggtaagaccgcc
gtcgcgctgcaccgcgcggcgtacctgctctacacgcatcgccagcagctgaccacgcgc
ggcgtgctggtggtcgggccgaacagcacgttcctgcgctacatcgggcaggtcctgccg
tctctgggcgagaccggggtgctgctggccacgatcgggcagctgtacccggggctggac
gccgacggcccggtcacccgcgaggccgccgagatcaagggtcgtccggtgatggccgac
gtgctcgccaacgccgtccgcgaccggcagcgcgtgccggaacccgtgctggagatcgag
ttcgagcgcgagatcctcatgctcgaccgcaagacctgcaccgaggcgcggacgcgggcc
cgccggtcgcgccgtccgcacaacctcgcccggcggatcttcgtctcggatctcctcgac
gcgctgacccggcaagccgccaagaagctgggggaggacctgctcgacgcgcgggacgtc
caggacatccgggccgaggtctccgcggacaagaacgtggcggccgcgatcaacgggctg
tggccgaaactcacccccgagatcgtgctggacgagttgttcgccgaccgcgaacggcta
cgcagcgcggcggggaaagccttgtcggacaccgaccgtgagcatctctacagcccgacc
gacgcgaagtggagcccgtcggacgtcccgctgcttgacgaactcgccgagctgctcggc
gaggacgacaccgaagcccgcgccgaggccgctcgccgcgagcgggaggaccgtgcctac
gcggaaggcgtgctcgacatcctcgaacaggacgaggagatcgtcgacgaggagctgctg
cgggtgggcgacgtcctcgacgcggagctgttcgccgagcgtcagcagcgccgcggcgag
atgaccgcggcgcagcgggccgcccaggaccggacgtggaccttcgggcacgtgatcgtc
gacgaggcgcaggaactgaccgcgatggactggcggctgctgatgcgccggtcgccgaac
cggtcgatgacactggtcggcgacgtcgcccagaccggcgcggccggtggggcgcggacg
tggggcgaggcgctttcgccgtacgtcgccgaccgctggcggctcgaggaactgaccgtg
aactaccggaccccggcggagatcatggccgtcgcgtcccgggtgctcgccgaggtcaac
ccggaactggaggcgccggtttcggtgcgggagacgggtttcgagccctggctgcggtcc
gtggacccggcggatctcgccgcggaactgcccggcatcgtcgacgccgaactgtccgct
gtggacggtgggacggtcgccgtgctgtgcccgccgccattggtcgcttcgctctcggag
acgctcggcgaggcgggggaccgggtgtcggtgatgccggtcgagcgggcgaagggcctg
gaattcgactcggtgctgctggtggcccccgacgaggtcgtcgcccggtcgccgcgcggg
ctcaacgatctttacgtggccctgaccagggcgacccggcggatgggcgtagtgcagacc
ggtgaccttgttcccgcgctggagggtcttggctaa
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