Amycolatopsis roodepoortensis: NQK81_42990
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Entry
NQK81_42990 CDS
T08507
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
aroo
Amycolatopsis roodepoortensis
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Gene cluster
GFIT
Motif
Pfam:
HTH_31
Glyco_hydro_42
HTH_3
Glyco_hydro_10
Xre-like-HTH
HTH_26
Glyco_hydro_39
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UUV31439
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Position
8985072..8986682
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AA seq
536 aa
AA seq
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MARRGRSGMASEAAATLAALLTEYKERSGLSYEQLGRKVHSSRSTVHRYCTGRNVPATFA
PIEAIATVCGASREDLAKLYRVWERADLGETPVPEPLVIPDTDAVEPHRRRPLTHIALVV
VLAAVLLAGGAVATPPDRQAQVTAPAVQAAMWTNAPRTLDPEFVGVTTNSNTGLMPTFRV
GSVRLWNTRTRWQNLEPARGQYDWKTLERLVTGARGAGFPVALTFGGTPSWASPNSPKSV
YTDDSRTGPPDDLADWERFVRAVVEQYRGRIDAYELWDMANHQDFFSGSMAGLVEMTRRA
SQVIKSADSAATVVCPSMGELWDPAAFEGFRRFAKLGGYDHCDAAAMKLAPRNDSDPPET
MLPLAQEIEKVLQEAGAGIRLWSTGSAYDVNRQRPVDEDRGAQHAVRFFLSGLYAQYRRM
YFYNWGSAKIPIVLQPAGGPHTKAARHVERLHTWLSGSRIHSCGQGRAAGLPDHLWQCRF
DQGGKDFLIWWTIDRSERIPAARGATSAEDLDGRSTLVEPGADVTVTGSPILLKLG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagggggcgcagcgggatggcgagtgaggcggctgccacgctggcggcactt
ctcaccgagtacaaggagcggagcggcctgagctacgaacagctcgggcgcaaggtgcat
tcgagccggtcgaccgtgcaccgctactgcaccggaaggaacgttcccgccaccttcgcg
ccgatcgaggcgatcgcgacggtgtgcggcgcgagccgcgaggatctcgcgaaactgtac
cgggtgtgggagcgcgcggacctgggcgaaacccccgtccccgaaccgctggtcatccct
gacaccgacgcggtggagccccatcgcaggcggccgctgacgcatatcgcgctcgtcgtc
gtcctcgcggcggtcctgctcgccggaggcgccgtggcgaccccgccggaccggcaggcg
caggtcacggcacccgcggtccaggcggcgatgtggacgaacgcgccacgcacgctcgat
ccggagttcgtcggggtgacgacgaactccaacaccgggctgatgccgacgttccgcgtc
ggctccgtccggttgtggaacacacgcacccggtggcagaacctggagcccgcccgcggt
cagtacgactggaaaacactcgaacggctggtgaccggtgcccgtggtgccggtttcccg
gtggccctgaccttcggcggcaccccgtcgtgggcgagcccgaacagcccgaagtccgtc
tacaccgacgattcccgcaccggtccgcccgacgacctcgccgactgggaacggttcgtg
cgggccgtcgtcgagcagtatcgaggccggatcgacgcctacgaactgtgggacatggcc
aatcatcaggacttcttctccggatcgatggccggtttggtggagatgacgcgcagggcg
agccaggtgatcaaatccgccgactcagccgccaccgtggtctgcccgtccatgggcgag
ctctgggatcccgcggcgttcgaggggttccggcggttcgcgaagctcggcggctacgac
cattgcgacgccgccgcgatgaaactggctccccgcaacgattccgacccaccggagacg
atgctgccgctggcgcaggagatcgaaaaggtgctgcaggaagccggcgccggcatcagg
ttgtggagcaccggctcggcctacgacgtgaacaggcagcggcccgtcgacgaggatcgg
ggtgcgcagcacgctgtccggttcttcctgtccggtctctacgcgcaataccgccgcatg
tacttctacaactggggcagcgccaagatccccatcgtgctgcagcccgcgggcggtccg
cacacgaaggcggcgcgacacgtggaacgcctgcacacctggctgtccggcagccggatc
cattcctgcgggcaagggcgcgcggccggattgcccgatcacctgtggcaatgccgcttc
gatcagggcggcaaggacttcctgatctggtggaccatcgaccggtccgagcggatcccg
gcggctcggggcgccacgtcggccgaagacctcgacgggaggagcacgctggtggaaccc
ggtgcggatgtcaccgtcaccggcagcccgatcctcctgaaactgggctga
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