Arcobacter roscoffensis: NJU99_04160
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Entry
NJU99_04160 CDS
T09051
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aros
Arcobacter roscoffensis
Pathway
aros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NJU99_04160 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aros03400
]
NJU99_04160 (uvrB)
DNA repair and recombination proteins [BR:
aros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NJU99_04160 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NJU99_04160 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
Kinesin
AAA_30
Microtub_bd
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTJ07291
LinkDB
All DBs
Position
856321..858294
Genome browser
AA seq
657 aa
AA seq
DB search
MAKFKVESEYSPAGDQPKAIEALSKSIQDGNQYNTLLGVTGSGKTYTMAKVIEKTQKPTL
IMTHNKTLAAQLYSEFKQFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINAELER
LRLSATASLLSFDDVIVIASVSANYGLGNPEEYKAMVQRIEVGFEYSQREFLLKLVEMGY
KRNDKFFDRSDFRVNGDVIDIFPAYYEDEFIRVEFFGDEVETITKHEYLTNDKVKELDEV
IIYSVNPFVVSNDKLATAVKQIEEELEERLINLKANDKLVEHQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGQKPGETPYSLMNYFESMHEEFLLIVDESHVSLPQFRGMHAADRSRK
EVLVDYGFRLPSALDNRPLKFDEFISRKASYLFVSATPNELEIEKSAVVAEQIIRPTGLL
DPKIEIMDSEHQVEKLFDEVKRVVEKDERVLITVLTKKMAEELASYYSDLGIKVKYMHSE
IDAIERNQIIRELRLGEFDVLIGINLLREGLDIPETSLVAILDADKEGFLRSRTSLIQTI
GRAARNQNGRVILFAKRITNSMQFAIDETARRRELQEAHNKKHGITPTSTKRRLDQNLKL
EEYDDLAWKKDKMEKMPAAERKKILIELNKQMKKAAKDLNFEEAIRLRDEIDKVKKI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttaaagtagaatcagaatactctcctgcaggagatcaaccaaaagcaata
gaagctttaagtaaaagtatccaagatggaaaccaatataatacactactaggtgtaaca
ggtagtggtaaaacttacactatggcaaaggttattgagaaaactcaaaagcctacactt
ataatgactcataacaaaactttagctgctcaattatactctgaatttaagcagttcttc
ccaaacaatcatgttgagtactttatctcttattatgattattatcaacctgaagcttat
attccaagaagtgatttatttattgaaaaagattcatcaattaatgctgaacttgaaaga
ttaagacttagtgcgacagcttctcttttatcctttgatgatgttattgttattgcatct
gtttcagctaactatggtttaggtaatccagaagagtataaagcaatggttcaaagaatt
gaagttggctttgaatattctcagagagaatttctactgaaacttgtagaaatgggttac
aaaagaaatgataaattctttgatagatcagactttagagtaaatggagatgttattgat
atattccctgcttattatgaagatgaatttattagagttgagtttttcggtgatgaagtt
gaaacgattactaaacatgagtatttaacaaatgataaggtgaaagaattagatgaggtt
attatctattctgtaaacccttttgttgtatcaaatgacaagttagcaacagcagttaag
caaatagaagaagaattagaagaaagacttattaatctaaaagctaatgataaattagtt
gagcatcaaagattaaaacaaagagttgagtttgatttagagatgattgagggaacgggt
atgtgtaagggaattgaaaactatgcacgacaccttacaggtcaaaagccaggtgaaaca
ccatattcacttatgaactattttgaatcaatgcatgaagagtttttgctaatagttgat
gagtcacatgtatctcttcctcagtttagaggaatgcacgctgctgatagatcaagaaaa
gaggttttagttgattatggttttagattaccaagtgctttagataatagacctttaaag
tttgatgaatttataagtagaaaagcttcatatttatttgtatctgcaacaccaaatgaa
ctagaaattgaaaaaagtgcggtggtagctgaacagattattagacctacaggtttactt
gacccaaaaatagagattatggatagtgaacatcaagttgaaaagctttttgatgaggtt
aaaagagtagttgaaaaagatgaaagagttttaatcacagttttaactaaaaaaatggca
gaagaattagcttcatactattctgatttaggaataaaagttaaatatatgcactctgaa
attgatgcaatagaaagaaatcaaattattagagagcttaggcttggtgaatttgatgta
cttattggtattaacttactaagagaaggacttgatattccagagacttcactagttgct
attttggatgcagataaagaagggtttttaagaagtagaacttctcttattcaaacaata
ggtagagctgcaagaaatcaaaatggtagggttattctttttgcaaaaagaataacaaat
tcaatgcagtttgcaattgatgaaacagctagaagaagagaacttcaagaagcacataat
aaaaagcatggcattacaccaacatcaacaaaaagaagattagatcaaaatttaaaactt
gaagagtatgatgatttagcttggaaaaaagataaaatggaaaaaatgccagccgcagag
agaaagaagatattaatagagttaaataaacaaatgaaaaaagctgcaaaagatttaaac
tttgaagaagcaattagattaagagatgaaattgataaagtgaagaaaatatga
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