Apteryx rowi (Okarito brown kiwi): 112962469
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Entry
112962469 CDS
T07573
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Pathway
arow03013
Nucleocytoplasmic transport
arow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112962469 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
112962469 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arow03019
]
112962469 (THOC1)
03041 Spliceosome [BR:
arow03041
]
112962469 (THOC1)
Messenger RNA biogenesis [BR:
arow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112962469 (THOC1)
Spliceosome [BR:
arow03041
]
Complex C
Other components
EJC/TREX
112962469 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112962469 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
112962469
NCBI-ProteinID:
XP_025914437
Ensembl:
ENSARWG00000013512
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MASSARAEERRTTGAMSPPLFSLPEARLRFTTSTREALNNKTLKPLLNAFNQIPGSENEK
KCTLDQAFRVIVEEEIINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLD
QCDKIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLF
PLSEKSGLNLQSQFNLENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCS
IPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLE
ELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTD
EQSLWIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPPDS
KPMRPVRKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFF
EEAIEQADPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVI
KLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFANKLGEQWK
ALAPYLEMKDSDIRQIESDSEDMKMRAKQLLVAWQDQEGTHATPENLITALNKAGLNDLA
ESLTNDTENSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagcgcgcgccgaggagcgtcggacgactggggcgatgtcgccgccrctc
ttcagcctgcctgaggcgcggctccggttcacgacttccaccagggaggctctgaataac
aaaactctcaaaccattgttgaatgcattcaaccagattcctgggagtgaaaatgaaaaa
aagtgcaccttggaccaagcttttagagttattgtggaagaagaaataataaacaaagct
ccgtgtgaaaatcttctggcaattatttctcttgctattaatggagtcacagaaggtatt
tgcactgcatcaaccccttttgtgcttctgggagatgttctggattgcctgcctttggat
cagtgtgacaaaatcttcacttttgtggagaaaaatgttgctacatggaaatcgaatacg
ttttattctgcggggaaaaattacttgctacgaatgtgcaatgacctcctaagaagatta
tctaagtcacaaaacacagtcttctgtggaagaattcagctgttcttggctaggttattt
ccactttcagaaaaatcaggacttaacttgcagagtcagtttaacctggaaaatgtcact
gttttcaataccaatgaacacgagagcactctaggacagaagcacacagaggagagagag
gaaggaatggacgtagaagaaggtgaaatgggagatgatgaagcaccaacaagttgttcc
attccaatagattataacctgtatagaaaattctggtcacttcaagattactttcggaat
cctgtgcagtgctatgagaaagtctcatggaaaacttttcttaagtactcagaagaagtt
ttggctgttttcaaaagttacaaattggatgacactcaggcttcccgaaaaaagttggaa
gaactgaaaacaggaggagaacatgtgtattttgcaaagtttctaactagtgaaaagttg
atggatttacagctgagtgacagtaactttcgccgtcacatcttgttgcagtatctaata
ctgtttcagtatctaaagggacaggtcaaatttaaaagttcaaactatgttctaacagat
gaacagtctctttggattgaagatactacaaaagcagtttaccagcttctttcagaaaat
cccccagatggggaaagattctcgaaaatggtagagcatatattaaatactgaagaaaac
tggaactcttggaaaaatgagggctgcccaagctttgtgaaagaaagacctccagattca
aagccaatgaggcctgtgagaaagaggccagctccagaggacttcttaggaaaaggacca
aacaaaaaaatccttatggggaatgaggagctaacacgtctttggaatttatgtcctgac
aacatggaagcttgtaaatctgagagtagggagtatatgccaacactggaggaatttttt
gaagaagctattgaacaagcagatcctgaaaacatggttgaaaataagtacaaggctgtg
aacaattctaactatggctggagagcattaagattactagcacgcagaagtccccacttc
ttccagccaacaaaccaacagttcaagagtttaccagaatatctagaaaacatggtaatc
aaattagccaaggagctgcctcctccttctgaagaaataaaaacaggcgaagatgaagat
gaggaagataatgatgctttattaaaggaaaacaatgaaagtccggaggtacagcgggac
aaagccatgactggtgaacaaattgagtcgtttgctaacaagcttggagaacaatggaag
gctttggccccctatttggaaatgaaggactctgatatacggcagattgagtcagatagt
gaagacatgaagatgagagccaagcagcttctggttgcctggcaggatcaagaggggaca
catgcaacacctgagaatctgattactgcactgaacaaagccgggttaaatgaccttgca
gaaagcctaacaaatgacaccgaaaacagtagttaa
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