Apteryx rowi (Okarito brown kiwi): 112963498
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Entry
112963498 CDS
T07573
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
arow
Apteryx rowi (Okarito brown kiwi)
Brite
KEGG Orthology (KO) [BR:
arow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arow01002
]
112963498 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arow04121
]
112963498 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arow04147
]
112963498 (USP13)
Enzymes [BR:
arow01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112963498 (USP13)
Peptidases and inhibitors [BR:
arow01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112963498 (USP13)
Ubiquitin system [BR:
arow04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112963498 (USP13)
Exosome [BR:
arow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112963498 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP
UCH_1
zf-UBP_var
UBA_3
UBA_4
Motif
Other DBs
NCBI-GeneID:
112963498
NCBI-ProteinID:
XP_025916408
Ensembl:
ENSARWG00000017078
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MNTFLGFGREHIERHYRKTGQCVYMHLKRHVIEKVPGASGGALPKRRNAKLFLDLETNGD
LSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQDPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
LEHYKEMGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGMKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKVPFSACL
QAFSEPNNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKLDVSIEM
PDILDINHLRAMGLQPGEEELPDVAPPIIIPDDPKDHMMNHFMESLDIDESAVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLAVSAFGGVASTGVTGLGAVGLD
NQPPEEMVAIIVSMGFQRNVAIQALKTTNNNLERALEWIFSHPEPEEESESALDMMDMEN
NVNANILAATGSEESRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaacagga
cagtgtgtatatatgcatctgaaacgacatgtgatagagaaggtaccaggggcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctagagacaaatggtgat
ctaagcagtgatgactttgaatatgaagatgaagcgaagcttgttatatttcctgatcac
tatgaaatctcattaccaaacatagaagagttaccagctctggtgacaatagcttgtgat
gcactcctcagcgcaaaatcaccctacaggaagcaggaccctgactcctgggaagaagaa
ctacaggcatctaaacatgccaagacacttgtacagttagacaatggtgttagaattccc
cccagtggttggaagtgctcaaaatgtgacctgcgggaaaatctgtggctaaacctgaca
gatggttcagtgctgtgtgggaagtggttctttgatggcagtgggggaaacggtcatgca
ctggaacactacaaggagatggggtatcccctggcagtcaagttgggaaccatcactcct
gacggagcagatgtctattcctttgatgaagaggagccggttttagatccgcatatagca
aaacatttggcacattttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgacatcaaaccaagagtctctgaatgggaagtaattcaggaagctggcatg
aaactcaagcccatgtatggcccaggatacactggcatgaagaaccttggaaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccaagaatatttgactactccccacttgatccaacacaagatttcaacact
cagatggctaaattgggacatggcctcctttcaggccagtactctaagccacccgtgaaa
tctgagcttattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
ccccgaatgtttaaggcttttataagtaaaggtcacccagaattttcctctaatagacaa
caagacgcacaggaatttttccttcatcttataaatctagtagagaggaaccctgttggt
tcagaaaaccccagtgatgttttccggttcctggtggaagaacgcacacaatgctgccag
tccagaaaggtccgctacactgagagggtggactatatcatgcaattaccagttgccatg
gaggcagccacaaataaagatgaattaatagcctatgaactgaagaggcgagaagcagaa
gctgctaggagagccccaccagagcttgtccgtgccaaggtcccatttagcgcgtgtctg
caggccttttctgaaccaaacaatgtagacgacttctggagcagtgctcttcaagcaaaa
tctgcaggagttaaaacttctcgttttgcttcatttcctgagtacttagtggtacagata
aagaagttcacctttggccttgactgggtacccaaaaagcttgatgtttctatagagatg
ccagacatactggacatcaaccacctaagggccatgggtctccagcctggagaggaggaa
cttccagatgttgctcctcccattatcattcctgatgatcccaaagatcatatgatgaac
catttcatggagtctttagatattgatgagtctgcagttatgcaactggcagagatgggt
tttcctttggaagcatgtcggaaagctgtatattatacgggcaacctgggtgctgaagtg
gctttcaactggatcattgcacacatggaagaaccagattttgcggaaccattggccgta
tctgcttttggaggggttgcttccactggagtgactggtttaggagctgttggactagat
aaccaacctcccgaagagatggttgccattatcgtttccatgggcttccaaagaaatgta
gcaattcaagcactgaagacgacaaacaacaatttggagcgcgcactggaatggatcttc
agccaccctgagcctgaggaagaaagcgagtctgctttggacatgatggatatggagaat
aatgttaatgccaacatcctcgcagcgacagggtcagaggaatccaggatcaaagatggg
cctggaagatatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactatgtttgtcatctcaaaaaagaaggaagatgggtgatctacaatgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttatcacaggatacca
agttag
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integrated database retrieval system
