Arthrospira platensis: NIES39_E03630
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Entry
NIES39_E03630 CDS
T02608
Symbol
rpoC1
Name
(GenBank) RNA polymerase gamma subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arp
Arthrospira platensis
Pathway
arp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NIES39_E03630 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arp03021
]
NIES39_E03630 (rpoC1)
03400 DNA repair and recombination proteins [BR:
arp03400
]
NIES39_E03630 (rpoC1)
Enzymes [BR:
arp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NIES39_E03630 (rpoC1)
Transcription machinery [BR:
arp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NIES39_E03630 (rpoC1)
DNA repair and recombination proteins [BR:
arp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NIES39_E03630 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
BAI90590
UniProt:
A0A9W3ZH65
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All DBs
Position
2785356..2787245
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AA seq
629 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKGI
PSYMAILLDMPLRDVEQVVYFNAYVVLNPGNADNLSYKQLLLEEQWLEIEEQIYAEEGEL
VGVEVGIGAEAIARLLEDIPLEEEAERLRTDIANAKGQKRAKLIKRLRIIDNFIATSSKT
EWMVLNVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIIRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPNLKMHQCGLPREMAIELFQPFVIHRLIRQNLVNNIKAAKKLIQRGDPSVWDVLEE
VISGHPVMLNRAPTLHRLGIQAFEPILVEGRAIKLHPLVCPAFNADFDGDQMAVHVPLSI
EAQAEARLLMLASNNILSPATGRPIVTPSQDMVLGCYYLTAQNPKAVRGKDRYFSNLEDA
IVAYNHGLLDLHAEIWVRFDGEVDLDEPEQLDREEKSADGSQTKLYVGHKSGNLTRRVRE
DKEGKMISQYVRTTAGRIIFNKTVLDALV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagttagagcaacgttttgattacgtcaaaattgggttagcgtctccagaacgc
atccgacaatggggggaacgtactttacctaacggtcaagtggtaggggaagttacgaaa
ccggaaactattaattaccggactttgaagccggaaatggatgggctgttctgtgagcgt
atttttggaccggctaaggactgggaatgtcactgtggtaaatataaacgagtccgacat
cggggtattgtctgcgaacgttgcggggtagaagttacagaatcgcgggtgcgacgacat
cgcatgggctttattaaactggcggctccggtgactcatgtttggtatctcaagggtatt
cctagctatatggcgattttgctggatatgcctctgcgagatgtggaacaggtggtttat
tttaatgcctatgtggtattaaatccggggaatgctgataatctctcctataaacaactg
ttgctggaagaacagtggctggaaattgaagaacaaatttacgcggaagaaggcgaactt
gttggggtggaagtgggtattggggctgaggcgatcgcccgccttttggaagatatcccc
ctggaagaagaagcagaacgattgcgaactgacattgctaatgctaagggtcaaaaacgc
gccaagttgattaagcgactgcggatcattgataactttatcgccaccagttctaaaact
gaatggatggttttaaatgtgattccggtaattcccccggatttgcggccgatggttcag
ttagatgggggtcgctttgctactagcgacttaaacgacctctatcgacgggtgattaac
cgtaataatcgcctggctcggttgcaggagattttagcgccggaaattattattcgcaat
gaaaagcgaatgctacaagaggcggtagatgccctaattgataatggtcgtcgcggtcga
actgtggtgggtgcgaataaccgacctttgaaatctctctcggatattattgagggtaaa
caaggccgcttccgtcaaaacttgctaggaaaacgggtcgattattcgggtcgttcggtc
atcgtggtgggtccgaatttgaaaatgcaccagtgcggactacctcgggaaatggcgatc
gaacttttccagccttttgtgattcatcgcttgattcgtcaaaatttggtcaataatatt
aaggcggcgaaaaagttgattcaacgcggcgatccgagtgtttgggatgtgttagaagag
gtgatttctggtcacccggttatgcttaaccgtgcgccaactctccaccgcttgggaatt
caggcttttgaacctatcctggtggaaggaagggcgattaaattacatcccctggtctgt
ccggcttttaacgctgactttgatggagaccaaatggctgttcacgttcctttgtctatt
gaggctcaggcggaagctcgtttgctgatgttggctagtaataatattctgtctccggct
acgggaaggcctattgtgacgccttctcaggatatggttttgggttgctattatctgact
gcacaaaatccgaaggctgtgcgaggaaaagatcgctatttcagtaacttggaagatgcg
atcgttgcctataatcacggtttgctggatttgcacgctgagatttgggtgcgttttgat
ggggaggttgacctagatgaacctgaacaacttgaccgagaggaaaagtctgctgatggt
agccagactaaattatatgttggtcacaaaagtgggaatttgaccaggagagttagagaa
gataaggaaggtaaaatgatttcccaatatgtgcggacaaccgctggtcgaattatcttc
aacaaaaccgtgctagatgctctggtttaa
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