Arthrobacter sp. Rue61a: ARUE_c23190
Help
Entry
ARUE_c23190 CDS
T02215
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
arr
Arthrobacter sp. Rue61a
Pathway
arr00521
Streptomycin biosynthesis
arr00523
Polyketide sugar unit biosynthesis
arr00541
O-Antigen nucleotide sugar biosynthesis
arr01100
Metabolic pathways
arr01110
Biosynthesis of secondary metabolites
arr01250
Biosynthesis of nucleotide sugars
Module
arr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
arr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ARUE_c23190 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ARUE_c23190 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ARUE_c23190 (rfbC)
Enzymes [BR:
arr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
ARUE_c23190 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ARUE_c23190 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
DUF6103
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AFR29220
LinkDB
All DBs
Position
complement(2561793..2563202)
Genome browser
AA seq
469 aa
AA seq
DB search
MKPGEQLHSRTTPIPGLLLFELAVHGDERGWFKENWHRAKMRDIGLPDFGPVQNNISFNA
ARGTIRGFHAEPWDKFVSLASGRIFGAWVDLREGPTFGTSFCAELTAHDAVFVPRGVGNA
FQTLEDDTAYTYLVNDHWSAEAQRDYTFLNLADEHVAVPWPIPLKSAILSPQDKKHPRLA
DVVPMPGRRTLVLGAEGQLGTALRHAFEGDATVEFAGRAQFDITSEASYRAVNWRSYSAV
INAAAFTAVDAAETPEGRAAAWNINATAVSRLARAAVEHSLTLVHVSSDYVFDGTAEVHF
EDEVPTPLGVYGQSKAAGDAAVAAVQKHYIVRTSWVVGEGRNFVRTMASLAAKGASPSVV
DDQWGRLSFAKDIAAGIRHLLDHQAPYGTYNLSNGGERQSWAGVARDVYRLSGADPERVT
PISTADYMGPGTAPRPRSSVLDLSKIRATGFDPPAATQRLAEFLRSLQL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgggagagcaactgcactcgaggaccacgcccattccaggcttgctgctgttt
gaactggcagttcatggtgatgaacgaggctggttcaaggagaactggcaccgggccaag
atgcgggacataggcctcccggacttcgggccggtgcaaaacaatatctccttcaacgca
gcacgcggaacgattcgtgggtttcatgccgagccatgggacaagttcgtgtccttggcc
tccggccgcatcttcggcgcctgggtagacctccgcgaaggtccaacgttcgggacctcg
ttctgcgctgaactgactgcccacgacgccgtgtttgtcccgcggggcgtaggcaacgcc
ttccagactctggaagacgacaccgcctatacgtacttggtcaacgaccattggagcgcg
gaggcgcagagggactacaccttcctcaaccttgccgacgaacacgtcgccgtgccctgg
ccgattcccttgaagagcgccattctgtctccacaggacaagaagcatccgcgcctcgcg
gacgttgttcccatgccggggcgccgcacgctggtccttggagctgagggccagttaggc
acagcactccggcatgccttcgaaggggacgccacggtggagttcgctggccgcgcgcaa
ttcgacatcacctctgaggcctcctaccgcgccgtcaactggcgctcttactccgcggtt
atcaacgccgccgcgttcacggcggtggatgccgccgaaactccggaaggtcgcgcagct
gcctggaacatcaacgcaactgctgtttcccgcctggcgcgtgccgccgtcgagcattca
ctgacattggtccatgtatccagtgactacgttttcgacggcacagcagaggtccacttc
gaagatgaggtgcccactcccctgggagtctacggtcagagtaaggccgcaggtgacgcg
gcggtagcggcagtgcagaagcactacatcgtcaggacaagttgggttgtgggcgagggg
agaaactttgttcgaaccatggcatcgttggcggccaagggcgcctcgccatcggtagtg
gatgaccaatgggggcggttgagcttcgcaaaagacatcgctgcgggaattcggcacctg
cttgatcatcaagccccttacggaacttacaacctcagtaatggcggggagcggcagtcc
tgggccggagttgcgcgggacgtgtacaggttgagtggagcggacccggaacgggtgacg
cccatcagcaccgcggactacatggggccgggaactgcgccgcgcccccgcagcagcgtc
ctggacttatccaagatccgtgccaccggctttgatcccccggcggcaactcagcgcctc
gctgagttcctcaggagcctgcagctctag
DBGET
integrated database retrieval system
