Arthrobacter sp. PAMC25564: E5206_18140
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Entry
E5206_18140 CDS
T06052
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
artp
Arthrobacter sp. PAMC25564
Pathway
artp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
artp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5206_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
artp03019
]
E5206_18140
03400 DNA repair and recombination proteins [BR:
artp03400
]
E5206_18140
Enzymes [BR:
artp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5206_18140
Messenger RNA biogenesis [BR:
artp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5206_18140
DNA repair and recombination proteins [BR:
artp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5206_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_RecD
Se_S_carrier
Motif
Other DBs
NCBI-ProteinID:
QCB98591
UniProt:
A0A4P7SW42
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All DBs
Position
3933773..3935653
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AA seq
626 aa
AA seq
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MTEAIAASADASRPGAPAGPGPAPDPDDAELRRLAAVTFGLPHLREGQLAGMHALVAGRD
VLAVMPTAYGKSAIYQVAALLLHRRLKCPAVVVSPLISLQEDQLEGLLQAVGPRGAVAIN
SGHSAADQERAWQSVERGEATFVFLAPEQLAKTSTVERIAALDIALFVVDEAHCVSAWGH
DFRPDYLRLGEVRERLGNPTTAALTATAAPPVREEILARLGLRDPLVLVHGFDRPNIRLE
VVRHHEEKEKRRAVIRQATELIAGLRGSGLPGSGLPGSGGCGLVYAAKRKDTEKYAAKLA
RNGLRAEAYHAGRTPAERESVHQRFLDGQLDVVVATTAFGMGIDKPDVRFVLHADIPESL
DSYYQQLGRAGRDGAPASAVLHYRSEDLGLRRFFATHIPDEASLLTVLTVLRDTVGPGAP
AAPETLAERSGFPARRLTGLLNQLQETGAVTVGKRGVRLSPTADLAQVVERAVELAEARR
RMDRSRIEMIRRYAETQGCRRQFLLGYFGEDLPEPCGNCDNCIDGTAHVQEHDAGAGAGA
GAGAAGAAGAGPFPLNSRVEHALWGPGLVMGHDGDLITVLFDREGYRTLSRKAVLAHGLL
TRCGDKSSPSGASREQAAANNVPNPK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggccatcgccgccagcgctgatgcttcgcgtcccggcgcaccggcgggtccg
ggccctgccccggacccggacgacgccgagctccgccggctcgccgccgtcaccttcggg
ctcccgcacctccgtgagggccagctcgccgggatgcatgcgctcgtggccggccgggat
gtcctcgccgtgatgccgaccgcctacgggaagtccgccatctaccaggtcgccgcgctg
ctgctgcaccgccggctgaaatgccccgccgtcgtcgtgtccccgctgatttccctccag
gaggatcagctcgaggggctgctgcaggcggtcggcccgcgcggcgccgtcgctatcaac
tctggccacagcgccgcggaccaggagcgcgcctggcagtccgtggagcggggcgaggcc
actttcgtgttcctcgccccggagcagttggccaagaccagcacggtggaacggatcgcg
gccctggatatcgccttgttcgtggtggacgaggcccattgcgtctccgcctgggggcac
gacttccgcccggactacttgcgcctcggcgaggtccgcgagcgcctgggcaacccgacg
acggccgccctgacggccaccgccgctcccccggtgcgcgaagagatcctggcccgcctc
ggactccgggacccgctggtcctggtccatggcttcgaccggcccaacatccggctggag
gtggtccgccaccatgaggagaaggagaagcgccgcgccgtgatccggcaggccaccgag
ctgatcgccggcctccgcggatccgggctgcctggctccggactgcctggctccggcggc
tgcgggctggtgtacgccgccaagcggaaggacaccgagaagtacgccgcgaagctggcc
aggaacggtctgcgcgccgaggcctatcacgccgggcgcaccccggccgagcgtgagagc
gtccaccagcggttcctcgacggccagttggacgtggtggtggccaccaccgccttcggc
atggggatcgacaagcccgacgttcgctttgtcctccacgcggacatcccggagtccctg
gacagctactaccagcagctcggccgggcggggcgggacggggcgccggcgtccgctgtg
ctgcactaccgctcggaggacctcggcctgcgccgcttcttcgccacgcacatccccgac
gaggcctcgctgttgacggtcctcacggtgctgcgcgacaccgtcggccccggcgccccg
gcagctccggagaccctggccgaacggtccggtttccccgcccgccgcctcaccgggctg
ctgaaccagctgcaggaaaccggtgccgtgacggtgggcaagcggggggtccggctcagc
cccacggcggacctcgcgcaggtggtggaacgcgccgtcgagctcgccgaagcgcggcgg
cgcatggacaggtcccgcatcgagatgatccgtcgctacgccgagacgcagggctgccgg
cggcagttcctgctgggctacttcggcgaagacctgccggagccgtgcggcaattgcgac
aactgtattgacggcaccgctcatgtgcaggagcacgacgctggcgctggcgctggcgct
ggcgctggcgccgcgggtgccgcgggtgccgggccgttcccgctgaactcgcgcgtggag
catgccctctggggaccgggcctggtgatggggcacgacggcgacctcatcaccgtgctg
ttcgaccgcgagggctaccggacgctgtcccggaaggcggtcctggcgcatggcctgctc
acgcgctgcggggacaagtccagtccctcaggagcttcgcgtgaacaggccgccgctaat
aatgttccaaaccctaaataa
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