Altererythrobacter rubellus: QQX03_08210
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Entry
QQX03_08210 CDS
T09134
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
arue
Altererythrobacter rubellus
Pathway
arue02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QQX03_08210 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arue03021
]
QQX03_08210 (rpoD)
Transcription machinery [BR:
arue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QQX03_08210 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
ATP11
Disulph_isomer
Motif
Other DBs
NCBI-ProteinID:
WIW94954
UniProt:
A0A9Y2B433
LinkDB
All DBs
Position
1644324..1646345
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AA seq
673 aa
AA seq
DB search
MASRTKSAPNKDDDAPLIDLNEASIKKLMTKAKKKGYVTLDELNEALPTDMDSEKIEDVQ
TALSEMGVQIVESDEDAEAEAEQEAEVAEMQVDEGKKDAKKPAAAAAAKKTTTGDRTDDP
VRMYLREMGAVELLSREGEIAIAKRIEAGRDMMIMGLCQSPITFHAIIQWSEALNNEEMQ
LREILDLDAMLSKEPPAEKLQDGAEDDDDDDISEETAGPTIRDDDDVEDEDDGEEGEDGE
GKKSDDDEDEDNTMSLAQMEEALKPDAIERFARITQTFKKFEKLQAERVETLAAGNEFPK
AKENRYEKLGEELTGEVESMQFHATKIEFLVDNLYAFNRRLTALGGQMLRLAERHKVKRL
DFLKAYVGNELDDGWLEANAKKDKKWAAFAEKEADAIDRIRAEISDIASQTGMSLTELRR
IVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEEGREPTP
EEMAARLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQANL
KETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKH
PSRSRKMRSFLDQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacggacaaaaagcgcaccgaacaaagatgacgacgctccgctgatcgacctc
aacgaagcttcgatcaagaagctgatgaccaaggcaaagaagaagggctacgtcacgctg
gacgagctgaacgaagctttgccaacggatatggattccgaaaaaatcgaggacgtccag
accgctttgtctgaaatgggcgtgcagatcgtcgagagtgacgaagatgctgaagctgaa
gccgagcaggaagccgaagtggctgaaatgcaggtcgatgaaggcaagaaagacgcgaag
aagcctgcagcggcggcggctgccaagaagacgacaaccggtgaccgaaccgacgatccg
gtgcgcatgtatctgcgcgaaatgggcgcagtggaattgctcagccgtgaaggcgaaatc
gcgattgcgaagcgcattgaggctggccgtgacatgatgatcatgggcctttgccaaagc
ccgatcacgttccacgcgatcattcagtggtccgaagcgctcaacaatgaagaaatgcag
ctgcgcgagatcctggatctcgacgcgatgctatccaaggaaccgcctgcagaaaagctg
caagacggcgccgaagatgacgatgatgacgatatctcggaagagaccgctggcccgact
attcgcgacgatgatgatgtcgaagacgaagatgacggcgaagaaggcgaagacggcgaa
ggcaagaaaagcgacgacgatgaagatgaagacaacaccatgtcgctcgcgcagatggaa
gaagcgctaaaacctgacgcaatcgaacgcttcgcgcgcatcacgcagaccttcaagaag
ttcgaaaaactccaggccgagcgtgtcgaaacactcgctgccggcaatgaattcccgaag
gccaaggaaaaccgctacgagaagcttggtgaagagctgaccggtgaagtggaaagcatg
cagttccacgccaccaagatcgaattcctggtggataatctgtatgcattcaaccgccgc
ctgacggcgctcggcggccaaatgctgcggttggccgaacgtcataaagtcaaacgcctc
gacttcctgaaagcctatgtcggcaatgagctggacgacggctggctcgaagccaacgca
aagaaagacaagaaatgggcggccttcgctgaaaaggaagccgacgcaattgatcgaatt
cgcgctgaaatctcagacatcgccagccagaccggcatgtcgctgactgaactccgccga
atcgtaaacatggtacagaagggcgagcgtgaagcgcgtatcgccaagaaggaaatggtt
gaggccaaccttcgcctggtgatctcgatcgccaagaaatataccaaccgcggcctgcaa
ttccttgacctaattcaggaagggaacatcggcctgatgaaagcggtcgacaagttcgaa
taccgccgcggctacaagttcagcacctacgcgacttggtggatccgacaggcgatcacg
cgctcgattgccgatcaggcgcgcactatccgtatcccggtccatatgatcgagacgatc
aacaagcttgtacgcacctcgcgccaattcctgcacgaggaaggccgagagcccactcct
gaggaaatggcagcacgcctctccatgccgctggaaaaggttcgcaaggtgatgaagatc
gccaaggaaccgatttctcttgagacaccaatcggtgacgaagaagattcacatctgggc
gattttatcgaagacaagaacgcaattatccctgtggatgccgcgattcaggcgaacctc
aaggaaaccgtcactcgcgtgctcgcatcgctcaccccgcgtgaggaacgcgtgctgcgc
atgcgcttcggtatcggcatgaacaccgatcacacgctggaagaggtaggccagcagttc
tccgtgactcgcgaacgtatccgtcagatcgaagcgaaggcgctgcgcaagctaaagcac
ccaagccgcagccggaaaatgcgttcgttcctggatcagtaa
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