Acipenser ruthenus (sterlet): 117396813
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Entry
117396813 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117396813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117396813
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117396813
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117396813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Baculo_IE-1
zf-B_box
zf-RING_11
zf-C3HC4_4
Prok-RING_4
zf-RING_4
STAT_alpha
zf-RING_10
Haem_bd
DUF2203
FYVE
Motif
Other DBs
NCBI-GeneID:
117396813
NCBI-ProteinID:
XP_033850908
LinkDB
All DBs
Position
30:1888512..1891876
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AA seq
648 aa
AA seq
DB search
MASAAILDPDIIREVLECSICMETFNQDQLRPKLLQCGHTVCRQCLEKLLASTINGVRCP
FCSKVSRMSNISQLADNLTVLKIIDSASSSATMCLMCKVCRNRLPKQYCQVCRLVLCDAC
KAEGHEQQGHPVLAIHAAAEQRRRDVGEKLSALRQMMQDIQKKKSALDGVSENCELKYKS
VQQDYAKAELGLQDELTKSRTAFSSSLSEIEKLNNQVLEEQTYLLNLAEVQLVSRCDYLT
MKIKQADLALLEEAIDEEELDLKCNLPVLLKLQEPELVQAEHLEPLGVGQVKTNQVTVNT
EEDYQEQAESSFSLYRDVDMVAEKACSLTASPSFKPKLVEPGASGSQQCQFIKKMGCKGN
LPGMFNLPVSLCVTMQGEVLVADRRNYRIQIFNRKGFQKEIRRSPSSIDNFVLSFLGADL
PNLIPLSIAINNQGLIGVTDNYDSSVKVYTLDGHCVACHKNQLIKPWGIAAMPSGQFVVT
DVEGGKLWSLAVDRSVGVVNCSRLCSAVRPKFVTCDSSGTVYFTQGLGLNIENRHNEHQL
EGGFSIGSVGTDGQLGKQLSHFFSENEDFRCIAGMCVDSRGDLLVADSGRKEILHFPKEG
SFSVLIQEGLTCPVGLAITPKGQLLVLDCWDHCVKVYNYHPRRQSCTD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcagcaatccttgacccagatatcatcagggaggtcctggaatgctcaatc
tgcatggagactttcaatcaggaccagttacggcccaaactcctgcagtgtgggcatact
gtgtgcaggcaatgcctggagaagctgcttgcaagcaccatcaacggagtgcgctgcccc
ttttgcagcaaagtgtccaggatgagtaacatctcccagctggctgacaatttgactgtc
cttaaaatcattgactctgcaagctcaagtgcaacaatgtgtttgatgtgcaaagtgtgc
aggaacagactaccaaagcagtactgccaggtgtgcagactggtgctgtgtgatgcctgc
aaagctgaggggcacgagcagcaaggtcaccctgtacttgccatccacgctgcggccgag
cagcgcaggagagacgtaggggagaagctgtctgctttgcggcaaatgatgcaggatata
cagaagaagaaatctgctctggatggagtctcagaaaactgcgagttaaagtacaaatct
gtgcagcaggactatgctaaagctgagcttggattacaggacgagctgacaaagtctcgc
acggctttttccagttccttgtcagaaatcgaaaaactgaacaaccaggttctcgaggaa
cagacctatcttttaaacctggcggaagtccagctggtatcgagatgtgactatctcacc
atgaaaataaagcaggcagatcttgctctgctggaagaggccattgatgaggaggagctg
gatttgaagtgcaaccttcctgtgcttctgaagctgcaggagcctgaactggtccaagct
gaacacctggagcctctgggtgtgggacaggtcaaaacaaaccaggtcactgtgaacacg
gaagaggattaccaggaacaggcagaatcttcattcagtttgtatcgagatgttgacatg
gtggctgaaaaagcgtgctctttgacagcatcgcccagcttcaaaccaaagcttgtggag
ccgggagcttctggatcacagcagtgccagttcattaagaaaatgggctgcaaaggcaat
ctgcctggtatgtttaatctccctgttagcttgtgtgttacaatgcaaggggaggtgctc
gtggccgatcgtagaaactacagaattcagattttcaatcggaagggcttccaaaaagaa
atccgacgaagcccgagcagcattgacaattttgttctcagttttcttggggcagatctt
ccgaatttgataccactgtcgatagccattaataatcagggactgatcggcgttacagat
aactatgacagttcagtgaaggtgtacacacttgatggccactgtgtagcatgccacaag
aatcagctaattaaaccgtggggcattgcagcaatgccttcaggacagtttgtagtcacg
gacgtggaagggggtaagctgtggagtctcgctgtggatcgcagtgtgggggttgtgaac
tgtagcaggctgtgttcagctgtccgccccaagtttgttacctgtgacagcagcgggact
gtgtatttcactcagggtctgggattaaacatcgagaacaggcacaacgagcatcagctg
gaagggggcttttccattgggtctgtgggtaccgacggacaactgggcaaacaactgagc
catttcttctcagaaaacgaggactttcgctgcattgctggaatgtgtgtggattccagg
ggagatctactggtcgcagacagtggtcgtaaagagattttgcactttcccaaagaaggg
agtttcagcgtcttgatccaagaagggctaacgtgtcctgttggtctggccataactcct
aaaggccagctgttggtgttggattgctgggaccactgtgtaaaagtgtataattatcac
ccaagaagacagtcctgtacagactag
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