Acipenser ruthenus (sterlet): 117396934
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Entry
117396934 CDS
T07327
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04010
MAPK signaling pathway
arut04137
Mitophagy - animal
arut04141
Protein processing in endoplasmic reticulum
arut04210
Apoptosis
arut04217
Necroptosis
arut04621
NOD-like receptor signaling pathway
arut04622
RIG-I-like receptor signaling pathway
arut04920
Adipocytokine signaling pathway
arut05132
Salmonella infection
arut05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117396934
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117396934
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117396934
09143 Cell growth and death
04210 Apoptosis
117396934
04217 Necroptosis
117396934
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117396934
04622 RIG-I-like receptor signaling pathway
117396934
09152 Endocrine system
04920 Adipocytokine signaling pathway
117396934
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117396934
09171 Infectious disease: bacterial
05132 Salmonella infection
117396934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117396934
04121 Ubiquitin system [BR:
arut04121
]
117396934
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117396934
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117396934
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
117396934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_5
Sina_ZnF
MATH
Motif
Other DBs
NCBI-GeneID:
117396934
NCBI-ProteinID:
XP_033851195
LinkDB
All DBs
Position
16:complement(1027531..1038288)
Genome browser
AA seq
560 aa
AA seq
DB search
MATQQDTSPPVSLDSLQSGFATNVLANKLEVKHLCNMCGLILRRPLQAPCGHRYCSGCLK
RMVSSGPQKCDACIKEEIFEEPISILTKDCAFPDNAARREVEALPAVCPNEGCVWKGTIK
DYETNHEGKCEFRMIPCPACCETIRFNEREHHSERECPERTLNCKYCKELFYFKNIKAHD
EICHKFPMTCEGCAKKKIPREKYVDHIKLCSKCKAPCRFHVVGCNASVENEKVPEHERMC
AYEHLNMLLHYIMNIKMNLEDLQPQSLENTSLKIHRLHESVTELELKLGQLNLAPVQGAA
AAASSRTLAPLLPVGPLEQQSSMLGELQRKTQELELKIGTLENIICVLNREVERSSTSIE
ANNRQHRLDQEKIEMLSNKVHQLERAMALKDLSIAETEGHLRELSAATYDGVFIWRISDF
SKKRQDAIAGRAPAMFSPAFYTSKYGYKMCMRIYLNGDGTGRGSHLSLFFVVMRGQSDAL
LKWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLLRLDAK
NSYIRDDTIFIKAIVDLTGL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccacccagcaggacacatcgcccccagtttccctggacagtctgcagtcaggattt
gctaccaacgtcctggcaaacaaacttgaagtgaagcatctttgtaacatgtgtggacta
atcttgagacggcctctccaagctccttgtgggcatcgttactgttcgggctgtctgaag
aggatggtgagctccgggcctcagaaatgtgatgcatgtataaaagaagaaatatttgag
gaaccaatatctatattaacgaaagactgtgcttttccagacaatgcggcccgcagagag
gtggaggctctgcctgcagtttgcccgaatgagggatgcgtgtggaaaggcactattaaa
gactatgagactaaccatgaagggaagtgtgagttcaggatgattccctgtccggcgtgt
tgtgagaccataagatttaacgaaagagagcaccacagcgaacgggaatgcccagaaaga
actttgaattgcaaatactgcaaagaacttttttattttaaaaacattaaggctcatgat
gagatatgccataaatttcctatgacctgtgaagggtgtgctaagaaaaaaattccaaga
gaaaagtatgtggaccatattaagttatgtagtaaatgtaaagcgccgtgcagatttcat
gttgttgggtgtaatgcatcagtggagaatgaaaaggtgccggagcacgagcggatgtgt
gcttacgagcacctgaacatgctgctccactacatcatgaacatcaagatgaacctggag
gaccttcagccccagagcctggagaacaccagcctgaagatccacaggctgcacgagtcc
gtgacagagctggagctgaagctggggcagctgaacctggctcccgtgcagggagccgcg
gccgccgcctcctccagaaccctcgcccctcttctgcccgtcggacccctggagcagcag
agctcaatgttgggagagctgcagaggaagacccaggagctggagctgaagatcgggacc
ttagagaacatcatctgcgtcctgaaccgcgaggtggagaggtcctccacctccatcgag
gcgaataatcgtcagcacaggctggaccaggagaagatcgagatgctgagcaataaggtg
catcagctggagcgcgcgatggcgctgaaagacctgtccatcgctgagacggagggacat
ctgcgtgagctctccgccgctacgtacgacggggtcttcatctggaggatatcagacttc
agcaagaaacggcaggacgccatcgccggccgcgcacccgccatgttctccccagctttc
tataccagcaagtacgggtataagatgtgcatgcgaatttacctgaacggagacgggacg
ggcagggggtcgcacctctccctgttctttgtggtgatgagggggcagagcgacgccctc
ctgaagtggcccttcaaccagaaggtcactctgatgctgctggaccagaataaccgggag
cacatcatcgacgccttccgccccgacgtcacctcctcctccttccagcggccggtcagc
gagatgaacatcgccagcggctgcccgctcttctgccctctcctcaggctggacgccaag
aactcctacatccgcgatgacaccatcttcatcaaggccatagtggatctgactggcctt
tag
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