KEGG   Acipenser ruthenus (sterlet): 117396934
Entry
117396934         CDS       T07327                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04010  MAPK signaling pathway
arut04137  Mitophagy - animal
arut04141  Protein processing in endoplasmic reticulum
arut04210  Apoptosis
arut04217  Necroptosis
arut04621  NOD-like receptor signaling pathway
arut04622  RIG-I-like receptor signaling pathway
arut04920  Adipocytokine signaling pathway
arut05132  Salmonella infection
arut05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117396934
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117396934
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    117396934
  09143 Cell growth and death
   04210 Apoptosis
    117396934
   04217 Necroptosis
    117396934
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117396934
   04622 RIG-I-like receptor signaling pathway
    117396934
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    117396934
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117396934
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117396934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117396934
   04121 Ubiquitin system [BR:arut04121]
    117396934
Enzymes [BR:arut01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117396934
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117396934
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    117396934
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_5 Sina_ZnF MATH
Other DBs
NCBI-GeneID: 117396934
NCBI-ProteinID: XP_033851195
LinkDB
Position
16:complement(1027531..1038288)
AA seq 560 aa
MATQQDTSPPVSLDSLQSGFATNVLANKLEVKHLCNMCGLILRRPLQAPCGHRYCSGCLK
RMVSSGPQKCDACIKEEIFEEPISILTKDCAFPDNAARREVEALPAVCPNEGCVWKGTIK
DYETNHEGKCEFRMIPCPACCETIRFNEREHHSERECPERTLNCKYCKELFYFKNIKAHD
EICHKFPMTCEGCAKKKIPREKYVDHIKLCSKCKAPCRFHVVGCNASVENEKVPEHERMC
AYEHLNMLLHYIMNIKMNLEDLQPQSLENTSLKIHRLHESVTELELKLGQLNLAPVQGAA
AAASSRTLAPLLPVGPLEQQSSMLGELQRKTQELELKIGTLENIICVLNREVERSSTSIE
ANNRQHRLDQEKIEMLSNKVHQLERAMALKDLSIAETEGHLRELSAATYDGVFIWRISDF
SKKRQDAIAGRAPAMFSPAFYTSKYGYKMCMRIYLNGDGTGRGSHLSLFFVVMRGQSDAL
LKWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLLRLDAK
NSYIRDDTIFIKAIVDLTGL
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggccacccagcaggacacatcgcccccagtttccctggacagtctgcagtcaggattt
gctaccaacgtcctggcaaacaaacttgaagtgaagcatctttgtaacatgtgtggacta
atcttgagacggcctctccaagctccttgtgggcatcgttactgttcgggctgtctgaag
aggatggtgagctccgggcctcagaaatgtgatgcatgtataaaagaagaaatatttgag
gaaccaatatctatattaacgaaagactgtgcttttccagacaatgcggcccgcagagag
gtggaggctctgcctgcagtttgcccgaatgagggatgcgtgtggaaaggcactattaaa
gactatgagactaaccatgaagggaagtgtgagttcaggatgattccctgtccggcgtgt
tgtgagaccataagatttaacgaaagagagcaccacagcgaacgggaatgcccagaaaga
actttgaattgcaaatactgcaaagaacttttttattttaaaaacattaaggctcatgat
gagatatgccataaatttcctatgacctgtgaagggtgtgctaagaaaaaaattccaaga
gaaaagtatgtggaccatattaagttatgtagtaaatgtaaagcgccgtgcagatttcat
gttgttgggtgtaatgcatcagtggagaatgaaaaggtgccggagcacgagcggatgtgt
gcttacgagcacctgaacatgctgctccactacatcatgaacatcaagatgaacctggag
gaccttcagccccagagcctggagaacaccagcctgaagatccacaggctgcacgagtcc
gtgacagagctggagctgaagctggggcagctgaacctggctcccgtgcagggagccgcg
gccgccgcctcctccagaaccctcgcccctcttctgcccgtcggacccctggagcagcag
agctcaatgttgggagagctgcagaggaagacccaggagctggagctgaagatcgggacc
ttagagaacatcatctgcgtcctgaaccgcgaggtggagaggtcctccacctccatcgag
gcgaataatcgtcagcacaggctggaccaggagaagatcgagatgctgagcaataaggtg
catcagctggagcgcgcgatggcgctgaaagacctgtccatcgctgagacggagggacat
ctgcgtgagctctccgccgctacgtacgacggggtcttcatctggaggatatcagacttc
agcaagaaacggcaggacgccatcgccggccgcgcacccgccatgttctccccagctttc
tataccagcaagtacgggtataagatgtgcatgcgaatttacctgaacggagacgggacg
ggcagggggtcgcacctctccctgttctttgtggtgatgagggggcagagcgacgccctc
ctgaagtggcccttcaaccagaaggtcactctgatgctgctggaccagaataaccgggag
cacatcatcgacgccttccgccccgacgtcacctcctcctccttccagcggccggtcagc
gagatgaacatcgccagcggctgcccgctcttctgccctctcctcaggctggacgccaag
aactcctacatccgcgatgacaccatcttcatcaaggccatagtggatctgactggcctt
tag

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