Acipenser ruthenus (sterlet): 117397107
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Entry
117397107 CDS
T07327
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04270
Vascular smooth muscle contraction
arut04625
C-type lectin receptor signaling pathway
arut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117397107
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117397107
09153 Circulatory system
04270 Vascular smooth muscle contraction
117397107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117397107
Membrane trafficking [BR:
arut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117397107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
PBP_sp32
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
117397107
NCBI-ProteinID:
XP_033851547
LinkDB
All DBs
Position
44:complement(3078078..3135600)
Genome browser
AA seq
1516 aa
AA seq
DB search
MQNTSSIKRFPAFDLISPEISKLRFPIRKPTRHGSILSKDPPPDKKHKSDKPTVSPQEFD
PTDHTLRKSKSFLDTSKPEAYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMR
AGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPHIPLSESESDPGA
LTSVTSPNSPGQTASSITAPQPVWHENNSVHNQKVDILQKMLSKELQDLQAMKEEYSRSP
TPKLQKEIQEAKKHIPQLQEQLSKATGGAQDGVQSSRPPSESLQISEVEDTSDGDQTLSP
RMDASGTDTRPNSGAVDVTSNFSSAFTDSHCQSDTPSHSPKTVPKDGVNSFETTHTEDTP
DQNSHFQSSVGSPASQLGTQIIGAEDDYFDTEQEQVNGQCSCFQSMELLKSRPAHLAAFL
HHVVSQFDPAPLLCYLYADLYKHTNSKETRRVFMDFNTFFMDRGANLKVAVPDGISSELE
RRRPEFIPEELHRQYIQLMQDTLLTDIQKNLEDFRQKRSMGLTLAESELTKLDMERLRDR
VGMERERSCAEQILSKIEEVLLTSQPTEEEKCTTMQYVILSYMKHLGVKVKEPRNLEHKR
GRMGSFLPKIKKSIKNEKEGEEKVKKPRFPSILGQPRRPSRNDSSAIGRAVELHNKRPQK
QSSQAPFNIPEHSEPGRGRLSLSSEGSEPAHTPCVITSPPPSAPDPDTGQSPSSAPPRPG
EALLSGDSVDLMSRTPTNVFEFPSSPLEHLPEEDHESDRVYEGGTPRPVRRMDTLGFIEV
QSEDDQSYELEADPPNWQQLVSRDVLAGLTPHEIKRQEVINELFYTERAHIRTLRVLDQV
FYQKLLSRDGILPPAEVKHIFSNLEEILQLHASIIEQVATIRKKNETSVIDQIGDDLLSW
FSGSEEEKIKRAAGTFCSNQPFALELIKTRQKKDNRFLTFIQEAESNPLCRRLQLKDIIP
TEMQRLTKYPLLLENIAKYTEDAVEKEKVKRAGECCRQILNYVNQAVKESENKQRLEDYQ
RRLDLSSLKQSEYPMIEEFRNLDLTKRKMIHEGPLTWKVNKDKTIELYTLLLEDILVLLQ
KQDDRLILKCHSKNLAGTAETKHIFSPVIKLNSVLVRQVATDNKAFFVLSMSDNGAHIYE
LVAQTVSEQKTWQYVITQRAGSIKTKPLSVIALTQPAPAINDGDREEEEEVSTTAHQKLS
KESERISTGSIQSPEKDVDVTSPVALQTTPSSPSPFEVLKPGEGGEGASFPESVLDERPP
FMQQRSRQAIAMDDEELVAFDFPPSPYRAEEALKNLMALKQVLLTHLLLEEEGSEEAHFR
HRSSAESSRAVSQRGSLDSSVARAHELRSDRASTASEPASPRTPENSPEREAALVNSEGA
KVRGEEAAPGEQMAEQFFESAEGYAESYLILEGYGGVGESSTDEDFLGVAGELNRRRGSA
GDSAIDLKKLLSSSSSSSSRRVSSNTTSELSRQVMAHMGLLQANLHHLKEVETRYNILCQ
RLAGSASDTEENKEKS
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacacttcatcaatcaaacggtttcctgctttcgatctcatctccccggagatc
agcaagctcaggtttcccatcagaaaaccaaccaggcacggtagcattctcagcaaggac
cctcccccggacaagaaacacaagagcgacaaaccgactgtgtcaccgcaggagttcgac
cctacagaccacaccctcaggaagagcaaatcttttctggacaccagtaaacccgaggcc
tatggtttggttcagcgctgtgttataatccagaaggatgacaatggctttgggctgacg
gtcagtggagacaaccctgtcttcgtgcagtctgtcaaagaagatggcgctgcgatgcgt
gctggagtgcagactggggacaggataatcaaggttaacggcaccttagtgactcattca
aaccatgtagaagttgttaagctgattaaatctggctcctatgtggcgctcacagtgctg
ggtcgtcccccagggttaccccacatcccgctgtcagaatccgagagtgatccaggggcc
ctgacttcagtgacctctcccaactcccccggacagaccgcgtccagcatcaccgccccc
cagccagtatggcatgaaaacaacagtgtccacaaccagaaggtggacatcctgcaaaag
atgttatcgaaagagctgcaggatttgcaggctatgaaggaggagtatagccggagcccc
accccgaagctacagaaggagattcaggaggcgaagaagcacattcctcagctgcaagag
cagctcagcaaagctaccggcggggcacaggacggggttcagtcctctcgtcccccctcg
gagtccctgcagatcagtgaagttgaggatacctctgatggggaccagaccctgtcccct
cgcatggacgccagcgggacagacacacggcccaacagcggggcggtcgacgttacatca
aacttttcctccgccttcacggacagccactgccaaagtgatactccctcccacagccca
aagacggtgcccaaggatggagtgaactccttcgaaacgacccacactgaagacacccct
gaccagaactcccatttccagtccagtgtgggcagccccgcgtcccagcttggaacacag
atcatcggggcagaggatgactacttcgatacagagcaggagcaggtgaacggtcagtgc
agctgcttccagagtatggagttgctgaagtctcgtcctgcacacctggctgctttcctc
catcacgtcgtctcgcagttcgatcctgcgccgctgctctgctacctctacgctgacctg
tacaagcatacgaattccaaagagacccgccgtgtcttcatggacttcaacaccttcttc
atggaccgaggggcgaatctgaaggttgctgttccagatgggatctcttcggagcttgag
cggaggaggccggagttcattccagaggagttgcatcgccagtacatccagctcatgcag
gacaccctgttaacagacatccagaagaacctggaagacttcaggcagaaacgcagcatg
ggcctgaccctggcggagagtgagctcaccaagctggacatggagcggctccgagaccgt
gtggggatggagagggagcgctcctgcgcagagcagatcctctccaagatcgaggaggtt
ctgttaacctcgcagcccactgaagaggagaaatgcaccaccatgcagtacgtcatcctc
tcctacatgaagcacctgggggtgaaggtgaaggagcctcgcaacctggagcacaaacga
gggcgaatggggagcttcctccccaaaatcaagaagagcataaagaacgagaaggagggc
gaggagaaggtgaagaagccgcgctttcccagcatcctcggccagccccgcagacccagc
cgcaatgacagcagcgcaatcggacgtgccgtggagctccacaacaagcgtccgcagaag
cagtcctcgcaagcacccttcaacatccccgagcactcggagcccgggcgagggcggctc
agcctgtccagcgagggctcggagccggcacacaccccctgcgtgataacctcccctcct
cccagcgcccccgacccggacactggccagtccccctcctctgccccccctaggccaggg
gaggctcttctctctggggactctgtggatctgatgtctcggacccccaccaacgtcttt
gagttccccagctcccccctggagcacctgccagaggaggaccatgagagtgacagagtc
tacgaggggggaacacccaggccagtcagaaggatggacacgctgggcttcatcgaggtg
cagagcgaggatgatcagagctacgagctggaggcagaccctccaaactggcagcagctg
gtgagccgggatgtgctggcgggactgacgccccacgagatcaagagacaggaggtcatc
aacgagctgttctacacggagcgcgctcacatccggacgcttcgggtgctggaccaggtg
ttttatcagaagcttctttcccgcgatgggatcctccccccggccgaggtcaaacacatc
ttcagcaacctggaggagatcctgcagctgcacgcttctataattgagcaggtggcaaca
atccgaaaaaagaacgaaacctcagtgatcgaccagataggagacgacctgctgtcatgg
ttcagcggcagcgaggaggagaagatcaagcgagcggccggcaccttctgcagcaaccag
cccttcgctctggagctcatcaagacgcgacaaaagaaggacaaccgattcctcaccttc
atacaggaggcggagagcaatccactgtgccgtcggctccagctgaaggacatcatcccc
acggagatgcagagactgaccaagtacccactgctgctggagaacatcgccaagtacaca
gaggacgccgtggagaaggagaaggtgaagcgggccggggagtgctgtcggcagatcctc
aactacgtaaaccaggccgtcaaggagtctgagaacaagcagagactggaagactaccag
cggagactggacctctcatcactgaagcagagcgagtaccccatgatcgaggaattccgg
aatctggacctgaccaagaggaaaatgatccacgaggggcctctgacctggaaggtgaat
aaagacaagacaatcgagctgtacacgctgctgctggaggacatcctagttctgctacag
aagcaggatgaccggctgatactcaagtgccacagcaagaacctggccggcactgcggag
acgaagcacatcttcagcccggtcatcaagctcaactccgtgctggtgcggcaggtcgcc
acagacaacaaagccttcttcgtgctctccatgtccgataacggggctcatatctacgag
ctagtggctcagaccgtgtcggagcagaaaacgtggcagtatgtgatcacgcagagggct
ggctccatcaaaaccaaaccgctcagtgtgattgccttaactcagccagctccagccatc
aatgatggggaccgcgaggaagaggaggaggtcagcaccaccgcgcaccagaaactgagc
aaagagtccgagcgcatctccacgggcagcatccagtctccagagaaagatgtggacgtc
acgtctccggtggctctgcagacgaccccgtcaagcccctccccctttgaggtgctcaag
cctggggaggggggggagggggccagcttcccggagtccgtgctggacgagcgacccccc
ttcatgcagcagcgctcccgccaggccatcgccatggatgacgaggaactggtggccttc
gacttccccccctccccgtacagggcagaagaagccttgaaaaacttgatggcgctgaag
caggtgctgctcactcacttgttactggaggaggaaggcagcgaggaggctcacttccga
caccgctcctccgcggagagcagcagggctgtgtctcagcgaggctccctcgacagcagc
gtggccagagcccacgagctgaggtcagaccgggcttccactgccagcgagccagccagc
ccacggacaccggagaacagcccggagagggaggcagcgctggtgaacagtgagggggcc
aaagtgagaggagaggaggcagcgccaggggagcaaatggcagaacagttcttcgagagc
gctgagggatatgcagaaagctacctgatcctggaggggtacgggggtgtgggtgaaagc
agcacagacgaggatttccttggggtcgccggggagctgaaccggcgccgaggatcagcg
ggggactctgcgattgacctcaagaagctcctctcttcctcctcttcctcctcctcgcgg
cgggtctcctccaacaccacctccgagctcagccggcaggtcatggcacacatggggctg
ctccaagccaacctgcaccatctcaaggaggtcgagaccaggtataatatattatgccaa
aggctggctggatcagcttccgacacagaggagaacaaagaaaagagttag
DBGET
integrated database retrieval system
