Acipenser ruthenus (sterlet): 117403896
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Entry
117403896 CDS
T07327
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03022
Basal transcription factors
arut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117403896
09124 Replication and repair
03420 Nucleotide excision repair
117403896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117403896
03400 DNA repair and recombination proteins [BR:
arut03400
]
117403896
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117403896
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117403896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
C1_2
IBR
Motif
Other DBs
NCBI-GeneID:
117403896
NCBI-ProteinID:
XP_033862268
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All DBs
Position
2:3050416..3059938
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AA seq
396 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEILKEDESGSLKATVENILFKAKRKRVFEPHGQVRLGMMRH
LYVVVDTSRTMEDQDLKPNRLTSTLKLLEYFVEEYFDQNPISQMGIITTKNKRAEKLTDL
AGNPKKHIADLKKAKDTTCVGEPSLYNSLSLAMQTLRHMPGHASREVLVIFSSLTTCDPA
NIYELIKSLKALKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELLQYHVKPHP
ASSSSECSLIRMGFPQHTIASTCDQDSKPSFSMAHLDSSGSGPSLTLGGYYCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDPFTETPLQDYQGEKFCQGCQGELKDQNVYM
CTSCQSVFCVECDLFIHESLHCCPSCIHSQPNPPGI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacccgaacgagccaaacgctgggaaggaggctatgagaggacctgggaa
atccttaaagaagatgaatcgggatccctcaaggcaactgtggaaaatattctgttcaag
gcgaagagaaaacgagtgttcgagccccatggacaggttaggcttgggatgatgcgtcac
ctgtatgtggtggttgatacttcaaggacaatggaagaccaggacttgaaacccaacaga
cttacaagtacactaaagctcttggaatattttgtggaagagtattttgatcagaaccca
atcagccagatgggaatcattaccacaaagaacaaacgggcagaaaagctgacagacctt
gctggaaacccaaagaagcacatagctgacttgaagaaagctaaagataccacgtgtgtt
ggagaaccctccctctataattcactcagtctagccatgcagactctgagacacatgcca
ggccatgctagcagggaagtgctggtgatatttagcagtctcacgacctgtgatccagcc
aacatttatgaattgataaagagtctgaaggctctgaaaatccgcgtgtcagtgattggt
ctgtctgctgaggtgcgggtgtgcactgtcctgactcgggagactggcggaacataccat
gttattttagatgaaagccactacaaagagctgctccagtatcacgtcaagccccatcct
gccagttccagctccgagtgctccctcattcgaatgggttttcctcagcatacaattgca
tccacgtgtgatcaggattccaaaccgtctttcagcatggcgcacctggacagcagtggc
agtgggcccagtctgacactgggagggtattactgccctcagtgcagagctaaatacact
gaactgcccgtggagtgcaaagtctgcggtcttacgttggtgtctgcccctcacctggcg
cggtcttttcatcaccttttcccattagatcctttcacagaaacacctttacaagactac
caaggagaaaagttttgtcaggggtgccagggagagctcaaagaccagaatgtgtatatg
tgcacgtcctgccagagtgtgttctgtgtggagtgtgatctcttcattcacgaatcctta
cactgctgcccctcctgtatacacagccagcccaaccctccaggcatctga
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