KEGG   Acipenser ruthenus (sterlet): 117407585
Entry
117407585         CDS       T07327                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
arut  Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:arut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117407585
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117407585
SSDB
Motif
Pfam: PRY zf-C3HC4_4 SPRY zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_6 MAP65_ASE1 zf-C3HC4_3 zf-RING_2 zf-RING_10 Sina_RING FemAB zf-ribbon_3 FapA Cas_DxTHG Hydrolase CHASE3 V_ATPase_I DUF4407 Etd1 DUF3450
Other DBs
NCBI-GeneID: 117407585
NCBI-ProteinID: XP_034775167
LinkDB
Position
Unknown
AA seq 565 aa
MAEMISEEQFVCSVCLEILKEPVTIQCGHSFCTGCIKKVWDQAEGTAAAAAAAATGSYSC
PQCKALFSPRPVLCRNTVLAEVVEKLRKSPRGGGEGLKPGPAAAGSGGEEVPCDFCTGTH
SKALKSCLVCLASYCETHLQPHRDKAALRRHRLIHPVRDFEGKLCESHQRVLEVFCRTDQ
TCICVLCTSEEHASHTTVSAEKERTEKQEQLGERRAEIHKRIQERLKELEELKQAVESLK
NIEKTAKEKAVVSQADELMDQLEQEITELKRRDAEMEQLSKTEDHIHFLQNCWSFCAPPE
SGLLPSVTVNTDVTFEAVRKAVSELKGQLEDIWKKEFVSITQTVNKVSCQRAPQSKNRKF
VRIDKVVNKASYLQVPEPKNRAEFLQYSCQLTLDPNTPYTELRLSEGNRKVSWVREPLPY
PDHPERFDSELQVLCTEGLSGTRCYWEIEWSGCGIEIGVTYKGISRKGGDASCQLGRNNK
SWSLWCSVLDGLFAWHNNKEIKITAPRSSRIGVYLDCPAGTLSFYSISPDDTMTLLHRFH
TTFTEPLYPGFRPYFMGSINICQLK
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggcagagatgatcagcgaggagcagtttgtctgctcggtgtgtctagagatattgaag
gagccggtcactattcagtgtggacacagcttctgtacggggtgcattaagaaggtctgg
gatcaggctgaaggcacagcagcagcagcagcagcagcagcaacaggctcctacagctgc
ccccagtgcaaagctctcttctcccccaggcctgttctgtgcaggaacaccgtgctggct
gaagttgtggagaaactgaggaagagccccaggggagggggagaggggctcaagcctggt
cctgctgctgctgggtctggaggtgaggaggtgccctgtgatttctgcaccgggacgcac
agcaaagccctcaaatcctgcttggtgtgcctggcttcctactgcgaaacccacctgcag
cctcaccgggacaaggcagctctgaggaggcacaggctgatccatcccgtgcgggacttt
gaagggaagctttgtgaaagccaccagagagtgctggaggtgttctgtaggaccgaccag
acctgcatttgtgtattgtgtacaagtgaggagcatgcaagtcacactacagtctctgca
gagaaagagaggacagagaaacaggagcagctgggggagaggcgggcagaaatccacaag
agaatccaggagagactgaaggagctggaggagctgaaacaggctgtggagtcactcaag
aatatagagaaaacagctaaagagaaagctgtcgtgagtcaggctgatgagctcatggac
caactggagcaggaaatcactgagctgaagaggagagacgctgagatggaacagctttca
aagacagaggatcacatccattttctacagaattgctggtctttctgtgcccctcctgaa
tctggcctcttacccagtgttactgtcaatacagacgtcacttttgaggctgtgaggaaa
gctgtgtctgaacttaaaggccaacttgaggacatctggaagaaagagtttgtgagcatc
actcaaacagtgaataaagtttcttgtcagcgggctccacaatcaaagaacagaaagttt
gtgagaattgataaagtagtgaataaagcttcttatctgcaagttccagaaccaaagaac
agagcagagtttttacaatattcctgtcagctcacactggaccccaacacaccgtacaca
gagctcaggctgtctgaagggaatagaaaagtgtcatgggtgagagaacccctgccatat
cctgatcacccagagagatttgactctgagctccaagtgctttgtacagagggtctgtct
gggactcgctgttactgggaaattgagtggagtggctgtgggattgaaataggagtcaca
tataaaggaatcagcaggaaaggaggggatgcttcctgtcaacttggaagaaataacaag
tcctggagtttgtggtgctctgttttagatggtctctttgcctggcacaataacaaagag
attaaaataactgccccccgctcctccagaataggagtgtacctggactgtcctgctggc
actctgtcattttatagcatctctcctgatgacacaatgaccctcctgcacagattccac
accacattcactgagccactctatcctgggtttagaccttatttcatgggttctataaat
atctgtcagctgaaatag

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