Acipenser ruthenus (sterlet): 117407585
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Entry
117407585 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117407585
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117407585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_6
MAP65_ASE1
zf-C3HC4_3
zf-RING_2
zf-RING_10
Sina_RING
FemAB
zf-ribbon_3
FapA
Cas_DxTHG
Hydrolase
CHASE3
V_ATPase_I
DUF4407
Etd1
DUF3450
Motif
Other DBs
NCBI-GeneID:
117407585
NCBI-ProteinID:
XP_034775167
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MAEMISEEQFVCSVCLEILKEPVTIQCGHSFCTGCIKKVWDQAEGTAAAAAAAATGSYSC
PQCKALFSPRPVLCRNTVLAEVVEKLRKSPRGGGEGLKPGPAAAGSGGEEVPCDFCTGTH
SKALKSCLVCLASYCETHLQPHRDKAALRRHRLIHPVRDFEGKLCESHQRVLEVFCRTDQ
TCICVLCTSEEHASHTTVSAEKERTEKQEQLGERRAEIHKRIQERLKELEELKQAVESLK
NIEKTAKEKAVVSQADELMDQLEQEITELKRRDAEMEQLSKTEDHIHFLQNCWSFCAPPE
SGLLPSVTVNTDVTFEAVRKAVSELKGQLEDIWKKEFVSITQTVNKVSCQRAPQSKNRKF
VRIDKVVNKASYLQVPEPKNRAEFLQYSCQLTLDPNTPYTELRLSEGNRKVSWVREPLPY
PDHPERFDSELQVLCTEGLSGTRCYWEIEWSGCGIEIGVTYKGISRKGGDASCQLGRNNK
SWSLWCSVLDGLFAWHNNKEIKITAPRSSRIGVYLDCPAGTLSFYSISPDDTMTLLHRFH
TTFTEPLYPGFRPYFMGSINICQLK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatgatcagcgaggagcagtttgtctgctcggtgtgtctagagatattgaag
gagccggtcactattcagtgtggacacagcttctgtacggggtgcattaagaaggtctgg
gatcaggctgaaggcacagcagcagcagcagcagcagcagcaacaggctcctacagctgc
ccccagtgcaaagctctcttctcccccaggcctgttctgtgcaggaacaccgtgctggct
gaagttgtggagaaactgaggaagagccccaggggagggggagaggggctcaagcctggt
cctgctgctgctgggtctggaggtgaggaggtgccctgtgatttctgcaccgggacgcac
agcaaagccctcaaatcctgcttggtgtgcctggcttcctactgcgaaacccacctgcag
cctcaccgggacaaggcagctctgaggaggcacaggctgatccatcccgtgcgggacttt
gaagggaagctttgtgaaagccaccagagagtgctggaggtgttctgtaggaccgaccag
acctgcatttgtgtattgtgtacaagtgaggagcatgcaagtcacactacagtctctgca
gagaaagagaggacagagaaacaggagcagctgggggagaggcgggcagaaatccacaag
agaatccaggagagactgaaggagctggaggagctgaaacaggctgtggagtcactcaag
aatatagagaaaacagctaaagagaaagctgtcgtgagtcaggctgatgagctcatggac
caactggagcaggaaatcactgagctgaagaggagagacgctgagatggaacagctttca
aagacagaggatcacatccattttctacagaattgctggtctttctgtgcccctcctgaa
tctggcctcttacccagtgttactgtcaatacagacgtcacttttgaggctgtgaggaaa
gctgtgtctgaacttaaaggccaacttgaggacatctggaagaaagagtttgtgagcatc
actcaaacagtgaataaagtttcttgtcagcgggctccacaatcaaagaacagaaagttt
gtgagaattgataaagtagtgaataaagcttcttatctgcaagttccagaaccaaagaac
agagcagagtttttacaatattcctgtcagctcacactggaccccaacacaccgtacaca
gagctcaggctgtctgaagggaatagaaaagtgtcatgggtgagagaacccctgccatat
cctgatcacccagagagatttgactctgagctccaagtgctttgtacagagggtctgtct
gggactcgctgttactgggaaattgagtggagtggctgtgggattgaaataggagtcaca
tataaaggaatcagcaggaaaggaggggatgcttcctgtcaacttggaagaaataacaag
tcctggagtttgtggtgctctgttttagatggtctctttgcctggcacaataacaaagag
attaaaataactgccccccgctcctccagaataggagtgtacctggactgtcctgctggc
actctgtcattttatagcatctctcctgatgacacaatgaccctcctgcacagattccac
accacattcactgagccactctatcctgggtttagaccttatttcatgggttctataaat
atctgtcagctgaaatag
DBGET
integrated database retrieval system