Acipenser ruthenus (sterlet): 117408535
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Entry
117408535 CDS
T07327
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117408535
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
117408535
NCBI-ProteinID:
XP_033869493
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All DBs
Position
2:63105449..63166032
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AA seq
2185 aa
AA seq
DB search
MMTLISSLEVLVCLLCTTRWAEGTFLRVNKGLKVMKGQSAFLAEEDLQFDIPKEKDACKV
EVVTNEPITQRVGRLTPQVFDCHFLPDEVKYVHNGCPILNEDNILLRLYRFTETETFTEM
FHLHVKLIEPDCNIITLGPKSLEVPEFYGISNVIDRNSLSFNYDRKLNLECTVRVATQET
LLPVHGQLVIGEPERTEPRGDEPHSFVPIAQRIMNRAGVKCKDEICRQGLKLVQTTKVNC
DDFLLMGLRYQHLDPPSPDIDYIAIRLDLTDTRSRNIHKSEHAWIPVRIKNAIPNQSPKP
AFMSMFILEVDQFILTPLTTGALDAEDSETPKSLLIFNITRSPPQGYITHLSDHTKPISS
FTWNDLNEILIAYQPPNSSHTERRNYEVEFEVHDFFFERSSPIMVHISIRTADTNAPRVS
WNMGLALLEGQSRPITWDQFQIVDNDNIKVVRLITVDGLQHGRLTVRGGKGFMFTVSDIK
AGVVRYHHDDSDTTKDFVVFRIFDGRHSTRHKFPINILPKDDSPPFLITNVMLELCEGQT
ALIQSSMLQASDMDSSDDYIVFNITRLPQAGEILKKPSPEVIGYPVGRFLQRDLFNAIVH
YQHLGNEVFEDSFEFILSDSHDPPNLSEPQVVIVHITPVDDQLPKEAPGVVRYLVVKETE
VVHLTKKQLHFTDVESPDRELTYTITTPPFFTSVYGRPDAGKLFLVDSIPKFTKDPAAPM
LRLFTQHAVNYMKVAYMPPIQDIGPDPQHIQFVFSVTNQHGGTLIGICFNITVLPVDNQP
PEVFTNQLKVEEGGVCLVSVDHLLVTDWDTREETIRVRLERKPHHGEVELDGFPIKEGGT
FTLQDIKNQKVRYRHDSSETLQDDILFIASDGINSADFVLQVKVLPVNDEVPVVKPGLNP
MLHCAEGQEVIITSKYIYSTDSDSDDQKLTYMIARQPYHGVVRKNGNIVDRFIQADIIAG
TVTFRHTGGEIGLNPQFDTITFVISDEEAGTHQSCCYDGPLPPAVRLHDLLPVYDLKITV
FPVDNQPPTIITGDMFVVDEGSSAPITINYLSVSDADTPLEELECVLASPPQFGYIENVL
PTPGFEKSNMGISIGSFTMKHVKERHINYVQSRHKRTEPTADQFMLYVTDGKHRSIETPF
YVIINPTNDEVPHFLARNITVQEGQMKELGPSIINVVDLDIPQDNLEFTIIQQPQHGMIM
NGIYGNDITRYKQHINGHHNHELPVHDFSMDDLKHGMKLMYVHDDSENMDDGFTIQLSDG
KHNVRRFVSVKIFPVNDEKPQVIKNNGLDVGMGESRIISSATLSAEDNDSPGEHLYFVFD
GIPKQGVLQRKVGSDWVAVSAGMNCTQEDIDMNLLRYTHTGAVGLLGQDSFSFHLWDGSN
RSPAQHFYITVKDMEKGDIAVFVKPLKISKGEQVMLTTDTLLSVDGTDKPEELMYVITSP
PSGGHIEYVSYPGVPITTFSQMDIAAQTVCFVHDNRAHSLKEVLRFVVSNGLSTQNGTME
IAVETADRVLPTVSRNTGLLVLEGSMMVIPPEALQLSDPDTPAHSLTFQLAQLPRYGQLS
RRGAPLLQHSFTQLDVNSRDLAYKHTGGDSQIDRFSFVASDGTNHGFLIDREKQTEPVFF
TIQVEQLDKSSPRIVHLQCVSKVELLKDGRYGSYISSRDLKATDADTKDEEIIFQILRPP
DFGYLENATTGDFVRQRFTQKDLNRRHILYVINPSLEALSDSLEFLVSDPTGNTGIPQML
ELKWSRIEFSQSEYVVCEDVGTLSLPITREGYAMESSFIGIKVNEFSASVGKDFTLSPSS
LIQFDPGVSTRTWNIGITSDRLEEAEEVFEVVLNSPVNTVLGSKTKLVVRITDSRKGQCS
NSKNTGQVPAVPRLRGQPSPVTAEYPPPSHGVIQVEKISLTPVEGTGWTRGDVSQEYNPP
PPKKRLRVIGNGKTVHPSYVERNGTDVVFTYHGIMSLRVEDDSSPSNSGKRAKVLVTSRG
QQRYPVGSPRSTELLHSDRATVHSTKQDDYSRSFPKPCTPDLKRLLHFDQSAQKLFHCDG
ISWKPWKPTSDDINAKKCPPGWIYHGTHCYYISTDHKSTWNSAARACKEIHRGNLVSVLS
KPDMTWLWDFSGRKPFWIGLNDRVKAGKWEWLGGEPVSFTNWRKGPPRASRKAGKNCVLV
QRRGKWQVKDCRKGKSHNYVCYVKT
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgatgacactgatttccagccttgaggtgctggtgtgtctgctctgcaccacacgctgg
gcggagggcacctttctgagagtcaacaaagggctgaaggtaatgaaagggcaatcagcc
ttcctggcagaggaagacctacagtttgacatccccaaagagaaggacgcatgcaaggta
gaggtggtcaccaatgagcccatcacccaacgggtgggcaggctaacaccacaggtgttt
gactgtcattttctcccagatgaagtgaaatatgtccacaatggctgtccaattctcaat
gaagacaacatcttacttcggctttacaggtttactgagacagagacattcacagaaatg
ttccacctgcacgtgaagctgattgaacctgactgcaacatcatcacgctgggacccaag
tccttggaggtgccggagttctatggcatctccaacgttattgataggaactcgctgtcc
ttcaattatgaccggaagctgaatttagagtgcacagtcagggtggccactcaggagact
cttcttcctgttcacggacagctggtcatcggggaaccagaaaggacagagccacgagga
gatgagccacacagctttgtccccattgcccagagaataatgaatagggcaggagtgaag
tgtaaagatgagatctgccggcagggactgaaactggttcagaccaccaaagtgaactgt
gatgacttcctactgatgggcctgaggtaccagcacctggatccaccctcacctgatatt
gactatattgctataaggctggacctcactgacaccagaagcagaaatattcacaagtcc
gagcatgcttggatcccggtccgcatcaagaacgcaatcccaaaccagtctcccaaaccg
gccttcatgtccatgttcatcctggaggtggatcagttcattctcacccctctgactaca
ggcgcactagacgctgaagacagcgagacccccaagtctctgctcatcttcaacatcacc
aggtctccgcctcagggctacatcacccacttgtctgaccacacgaaaccaatctcatcc
ttcacctggaatgacctcaatgagatactgatagcctaccagcccccaaacagcagtcac
acagagcggaggaactatgaggtcgagtttgaggtccatgatttcttctttgagagaagc
tcaccgattatggtgcatatctcaatcagaacagcagacaccaatgctcccagagtttct
tggaacatgggtcttgctctcttagaaggacagtcccgcccaatcacctgggaccagttt
cagattgtagacaacgataacataaaagtggttcgtctgatcactgtggatgggctacag
catggcaggcttactgtaagagggggaaaaggctttatgttcaccgtgagcgacatcaaa
gctggggttgtgcgttaccaccatgatgacagtgataccactaaagactttgtagtcttc
aggatattcgatgggcgccacagcacacgccacaagttccccatcaacatcctgccgaag
gacgacagcccacccttcctcatcaccaatgtgatgctggagctgtgtgagggccagacc
gcccttattcagagctccatgctgcaggcctctgacatggactccagcgatgactacatt
gtcttcaacatcacccgcctgccacaggccggggagatcctgaagaaaccaagccctgaa
gtcataggttatcctgtaggtcggttccttcagagagatctgttcaacgccattgtgcat
tatcagcatctgggaaatgaagtgtttgaggattcctttgagtttattctctcagacagc
catgacccacccaatctatcagaaccacaggtcgtcatagtgcacataactcctgtggat
gaccagctgcctaaagaagcacctggggttgttcggtatctggttgtcaaggagacagag
gttgtgcacctgaccaagaagcagctacacttcacagatgtagagtcacctgacagagag
ctcacctacaccatcaccaccccgccattctttacctctgtttatgggagacctgatgct
ggaaaactgttcctggtcgacagcatccctaaatttacaaaagatccggctgctcccatg
ctgaggttgtttacacagcatgctgtgaactacatgaaggtggcctacatgcctccaatc
caggatataggacccgaccctcagcacatacagtttgtgttctctgtcactaaccaacat
ggcggcacattaattggcatctgcttcaacattacagtcctgccagtggataaccagcca
cctgaggtgttcaccaaccagctgaaggtggaggaaggaggggtgtgtctagtgtctgtg
gaccacctgctggtgacggactgggacaccagagaggagacaatacgggttcgactggag
agaaagccccatcacggggaggtggagctggatggcttccccatcaaggaggggggaacc
ttcaccttgcaggacatcaaaaaccaaaaagttagatatcgtcatgacagctctgagacg
cttcaggatgacattctctttattgcttcagatggcatcaattctgcagattttgttctg
caagtcaaggtgttgccagttaatgatgaagtgccggtggtaaaaccaggccttaatccc
atgttgcattgcgcagagggccaggaagtgattatcacttccaaatacatctactccacc
gacagtgacagtgatgaccagaagctcacctacatgattgcacgtcagccataccatgga
gtagtgcgtaagaatggtaacattgtggatcggttcatccaggctgatattattgctggg
actgtcacattcaggcatacaggaggggagattggactgaatccccagtttgacaccata
acctttgttatctctgatgaagaagccggcacgcatcagagctgctgctatgatgggcct
cttccacctgcagtgcggcttcatgatttgcttcctgtgtacgaccttaaaatcactgtc
tttcctgttgataaccagcctcccaccatcatcactggggacatgtttgttgttgatgaa
ggatcttcagccccaataactatcaactacctgagtgtcagcgatgctgatactcctctg
gaagagttagagtgtgtcctggcttctcctccacagtttggctacatagaaaacgttctg
ccaactccagggtttgaaaagagtaatatgggcatcagcataggctcatttaccatgaaa
cacgtgaaggaacgccatattaactacgtgcagtctcgacacaagaggaccgaacccact
gcagaccagttcatgctctatgtcacagatggcaaacaccgttccattgaaacacccttt
tacgtcataatcaacccaactaatgatgaagtcccacattttttggcaaggaacatcact
gtgcaagagggccaaatgaaggaactgggcccatctataatcaacgtagtggacttagat
atcccccaagacaacctggaattcaccataattcaacagccacagcatggaatgattatg
aatggaatctatggaaatgacatcacacgctataaacaacatatcaatggtcaccacaat
catgagcttcctgtgcatgatttctcaatggacgacctgaagcacggaatgaagcttatg
tacgtacatgatgactcagagaatatggatgatggcttcacgattcagctgtctgatgga
aaacacaatgtccgcagatttgtttcggtcaagatctttcctgtcaacgatgagaaaccc
caagttataaagaacaatggattggatgtggggatgggagaatccaggattatttccagt
gcaaccctctctgcagaagataatgactctcctggcgagcatctctactttgtgtttgat
ggcattccaaagcaaggagtacttcagagaaaggtaggctctgactgggttgctgtctct
gctgggatgaactgcactcaggaggacattgatatgaacctcctgaggtacacgcacaca
ggagctgtaggactcctaggccaggattccttcagctttcatctatgggatgggagcaac
cggtctccagctcagcacttctacatcacagtcaaggacatggagaaaggagacattgct
gtttttgttaaacccctcaaaatctccaaaggagagcaggtgatgttgaccactgatact
ttgctttccgtggatggcactgacaagcctgaagagctgatgtatgtcattacctctccg
ccttccggtggccacatagagtatgtcagctaccctggggtgcccatcaccactttcagc
cagatggatatcgctgcacagactgtctgctttgttcatgacaacagagcacattcactg
aaggaggtgttgagatttgtcgtcagcaacggcctgtccactcagaatgggacgatggag
attgctgtggagactgctgaccgtgtcctgcctacggtctcccgcaatacgggcctgctg
gtgctggagggctcgatgatggtgattccacccgaggccctgcagctctctgacccggac
accccggcacacagcctcactttccagctggcacagctcccacgatacgggcagctctcc
cggcgcggtgccccgctgcttcagcacagcttcacccagctcgatgtgaacagcagggac
ctggcctacaaacacactggaggggactcccagatagaccgcttcagctttgtggcttct
gacgggaccaaccacggtttcctcattgacagggaaaagcagacagagccagttttcttc
actatccaggtagagcaactagacaagtcttctcctagaatcgttcacctccagtgcgta
tcaaaggtggaattgttgaaggacggccgttacgggagctacatctcctccagagacttg
aaagcaacagatgccgataccaaggatgaggagatcatcttccagatactacggcctcct
gattttggttacctggaaaacgcgacaacaggagactttgttcgacagaggtttactcag
aaggatttaaacagaagacatattctttatgtcatcaatccatctctggaggccctgtct
gacagcctggagtttttggtctcagacccaacaggaaatactggaattccacaaatgctt
gaactgaagtggtctcgaatcgagttctcccagtctgagtatgtggtgtgtgaagatgta
gggacactttcattgccaatcactagagagggctatgcgatggagtcttctttcattgga
atcaaggtcaatgagttctctgcttctgtcgggaaggattttactctcagcccctccagt
ttgatccagtttgatcctggggtttcgaccaggacttggaacatagggattacaagtgac
agactggaagaagctgaggaggtgtttgaggtggttctcaactcccctgttaacactgtg
ctaggaagcaagacaaaattagtggtgagaatcactgactcaaggaaaggtcagtgtagt
aacagtaaaaacactggccaggtcccagctgtccctcgactaagaggtcagccgtcccca
gtcactgctgagtatcctccccccagccatggtgtaatccaagtggagaaaatctcactt
acccctgtagagggcactgggtggacaagaggcgatgtatcacaggaatacaacccacct
ccaccaaagaaaagactcagggtcattggaaatgggaaaacggtccatccttcatatgtt
gaacgaaatgggacagatgtagtgtttacataccatgggatcatgtcgctcagagtggag
gatgatagctctccatctaactctggcaaaagagccaaggtactggttaccagtagaggg
cagcagaggtatcctgttggttctcctagatccactgagctcctgcattctgacagagcc
actgtccactccacaaaacaggatgactacagcagatcctttcctaagccctgcacacct
gacctgaaacgccttcttcattttgaccaaagtgcccaaaaactgtttcattgtgatggg
atttcttggaaaccatggaagccaaccagtgatgacatcaatgctaaaaaatgtcctcct
ggatggatctaccatggaacccattgctactacatcagcactgaccacaaatcaacatgg
aattcagctgcaagagcttgcaaggaaatacatcgtggcaatctggttagtgtcctctca
aaacctgatatgacgtggctgtgggatttcagcggaaggaagccattttggattggcctg
aatgacagagtgaaggcagggaaatgggagtggcttggtggagagccagtgtccttcaca
aactggaggaaaggacccccacgggcatcaaggaaggctggaaagaactgtgtgttagtg
cagagaagagggaagtggcaagtgaaagattgcagaaaaggaaaaagtcataactatgtc
tgctatgtgaaaacatga
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