Acipenser ruthenus (sterlet): 117410788
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Entry
117410788 CDS
T07327
Name
(RefSeq) thrombomodulin-like
KO
K03907
thrombomodulin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
arut04090
]
117410788
00535 Proteoglycans [BR:
arut00535
]
117410788
04091 Lectins [BR:
arut04091
]
117410788
CD molecules [BR:
arut04090
]
Proteins
117410788
Proteoglycans [BR:
arut00535
]
Cell surface proteoglycans
Others
117410788
Lectins [BR:
arut04091
]
C-Type lectins
Group 14: Thrombomodulin
117410788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cEGF
FXa_inhibition
EGF_CA
Lectin_C
EGF
EGF_3
Tme5_EGF_like
hEGF
Plasmod_Pvs28
DUF3147
DUF6006
ECSCR
Motif
Other DBs
NCBI-GeneID:
117410788
NCBI-ProteinID:
XP_033873502
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All DBs
Position
6:27158294..27160933
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AA seq
542 aa
AA seq
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MYKDFFSIITALQLFLQTTGQPPKSGLCIGNDCYTIHQDSKAFQNANDVCSTQQGHLMTV
RSTVANDAMSTLMANEQGDFWIGLQLPEGQCTNNDITLRGYEWVTGEESTRFSNWKGNDS
TCTQQCVSVSSDLIWEERPCQDKLAGFLCEYNFNKTCEALPADTDLSILYSTTLGFQGAD
LRSLPPGSTATCSPSGFKVYCSSKGDWMVGPWDCQIDNGGCEHQCQMINSQPQCICPPGS
QLKGNKFTCMEIDICSIATCEHICVPHNDSYLCMCQEGYDLDPDGKRCRDIDECKIGHNL
CEQDWVCVNTPGSFKCKCKSGFVEEKGACEDVDECQRYPCDHDCKNVLGSYQCTCFEGYI
QDSENHLKCKLHCSTSECPAECDPNISWQCHCPDGFVLDMRENGHFCIDINECEMGTYCE
QLCDNSFGSFTCYCHDGYSIDSDGYSCVPEDTEEGSGTTGVTPVISIFVNPTSNCTIEGQ
TLLTPGALFGIIVCIVVVILILAFLVHHILKQRVKCDASSDFKSSDAEEEVDLQQVTTLK
YA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagattttttttccattattacagccttgcagctgttcctgcaaacaacaggc
caaccacccaaaagcggcttgtgcattgggaatgattgctacaccatacaccaggactcc
aaggcgtttcagaatgcaaatgatgtgtgcagcacgcagcaaggacatttaatgacagtg
cgatcaacagtggccaacgatgcaatgtctaccctgatggctaacgaacaaggagatttc
tggattggcctgcagcttcctgaaggacaatgcaccaacaatgatataacactaagaggg
tatgagtgggtaacaggagaagaaagcacacgtttttcaaattggaaaggcaatgattca
acatgcactcagcagtgtgtctcggtttccagtgatctaatttgggaagaaagaccatgt
caggataaactggcaggatttttgtgtgaatacaatttcaataaaacatgtgaagctcta
cccgcagatacggacctctctattctatacagcacaactctaggttttcagggagctgac
cttagatcacttccaccgggaagtactgcaacctgttcaccctctggtttcaaagtttac
tgttccagtaaaggcgattggatggtgggtccttgggattgccagattgataatggtggt
tgtgaacatcagtgccaaatgatcaacagtcagccccagtgcatctgtccaccaggtagt
cagctgaaaggtaataagtttacctgcatggaaatagatatatgcagcattgcaacttgt
gaacatatatgtgttcctcataatgacagctacttatgtatgtgtcaagaaggatatgat
ctggatccagatggcaagcgatgcagagacattgatgagtgtaaaattgggcacaatctt
tgtgaacaggactgggtgtgtgtgaacacacctggaagtttcaaatgtaagtgcaaatct
gggtttgttgaggagaaaggggcatgtgaagatgttgatgaatgccagagatacccctgt
gatcatgactgtaaaaatgtactggggagctaccagtgtacctgctttgaggggtacatt
caagactcagaaaaccatctcaaatgtaagttacattgttctacttctgaatgccctgct
gaatgtgatccaaatataagctggcaatgtcattgtccagatggatttgtattggacatg
agggaaaatgggcatttctgcatagacataaacgaatgtgagatggggacctactgtgag
cagctgtgtgataactcatttggaagttttacatgttattgtcacgatggctactctatt
gacagtgatgggtattcttgtgttcctgaagatactgaagaaggttcaggcaccacagga
gttactccagtcattagcatttttgttaaccccacttcaaactgtactatagaggggcaa
actctgttaacacccggagctctttttggaatcatcgtttgcattgtggtggtgatcttg
atcctagctttccttgtgcaccacattcttaaacagcgtgtgaaatgtgatgcatcttca
gactttaaaagcagcgatgcagaagaagaagttgaccttcagcaggtgaccacactgaag
tatgcttag
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