Acipenser ruthenus (sterlet): 117411975
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Entry
117411975 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
arut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117411975
03015 mRNA surveillance pathway
117411975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117411975
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
117411975
mRNA cycle factors
P-body specific factors
117411975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
117411975
NCBI-ProteinID:
XP_033875767
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Position
20:complement(3800127..3805222)
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AA seq
465 aa
AA seq
DB search
MKEDKENARPREKTVDTNYDENEKCEKPSKEKKEIMTKIVIRRLPPSLTKEQLEEQLEPL
PEVDYVEFFANDTSLYPHLFSRAYINFKNQEDIVLFRDRFDGYVFIDNRGQEYPAVVEFA
PFQKIAKKKSKKKDAKAGTIEEDPDYKKFLDIYNGDEEKLTSTPETLLEEIEAKTKELEA
AKKTTPLLDFLKNKQRIREEKREERRRRELERKRLRDEDRRKWREEDRRKRKETEKHRKG
GEKSKEEPKMKLLRKPEKGDDLDSDKVKEKPKKVEKERIKDDKPSTGVGGELKKRQESAH
WDEKGRKTEEESRKDYRDRDFERDRERDRDREREKERERRQREKERMRRQDEERRRRRDX
HDPENTYRRRDEEVKKEKDRVWEKKKSDSAADSTSNPDKPERSAKEEKKDGPSKRDRLRN
KDRPAIQLYQPGARNRGRVPASAEFPGEEQTPEGETKSPQEKGEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggataaagagaacgccaggccgagggagaagacagtggacacgaactatgac
gagaacgaaaagtgcgagaagcccagtaaagagaagaaagagatcatgacgaagattgtt
atccgtcgccttcctcccagtttgacgaaggagcagttggaggagcagctcgagcccctc
cccgaggtggattatgttgagttttttgccaatgatacaagcttgtatccacatctgttt
tccagggcctatatcaatttcaaaaaccaagaagacattgttttgtttagagatcgattt
gatggctatgtattcattgataacagaggccaggagtacccggctgttgtggagtttgcc
ccttttcagaaaattgccaaaaagaagagcaagaaaaaggatgccaaagctggaacgatt
gaagaagacccagattataagaagttcttggacatctacaatggagatgaagaaaagtta
acttctactcctgaaactctccttgaagaaatagaggccaaaaccaaggaactagaagct
gcaaagaaaactactccacttttggactttctgaaaaacaaacagagaataagggaggag
aagcgagaggagaggaggaggagggagctggaaaggaagaggcttcgggacgaggatcgc
aggaaatggagggaggaggaccggaggaaacgcaaagagactgaaaagcacagaaaagga
ggcgagaaatcgaaagaagagccaaaaatgaagctcctgaggaagccagaaaaaggagat
gatcttgactcggacaaagttaaagagaaaccaaagaaagtggaaaaggagaggataaag
gatgacaagccctctacaggggttgggggtgagctgaagaaacgtcaggagagtgcacac
tgggatgaaaaaggaaggaagacagaagaggaaagccgaaaggattatagagacagagac
tttgagcgagacagagaaagggaccgggacagagagagggagaaggaaagagagaggcgt
cagagagagaaggaacggatgaggcgccaggacgaggagcggcgccggaggagggattga
cacgaccctgaaaacacgtacaggaggcgagatgaggaagtaaagaaagagaaagaccgc
gtgtgggagaagaagaaaagcgacagcgccgcggactccacatccaacccagacaagcct
gaaagatcagccaaggaggagaagaaggatgggcccagcaagagggaccgtttgagaaac
aaggatcggccggccatacagctgtaccagcctggagcacgaaaccgtggccgtgtacct
gccagtgcagagtttccaggtgaagagcagacccctgaaggggaaaccaagagccctcaa
gagaaaggagaagaatga
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