Acipenser ruthenus (sterlet): 117415969
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Entry
117415969 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117415969
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117415969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PPK2
U-box
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117415969
NCBI-ProteinID:
XP_034772161
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MESEMAEANILVGEDHFSCPVCLDILKNPVAIPCGHSYCMGCIKNCWDQTDHIGIYSCPE
CRETFTPRPVLRRNTMLAEVVEKLKKTGLKPPPAQNYARLGDVQCDFCTGRKFKAVKSCL
TCLASYCETHVKPHYEAAAFKRHKLVDATGNLDQKLCAEHQKMLDGFCRTDQMCICWLCA
DKKHKSHDTVSADTERTAKQKQLREAQAELQQRILERLKELGELKQAVHLLKSTAQTEIK
ESKMIFTALIRSIKRVRAEVLVLIEANEKASVNQAEGLIKRLEQEIDALRRRNAELKQLS
ETEDHIHFLQNFQALCAPPVTGDLPSVTVNPNISSGPIRKVVAELKEHIEDFCKGELSKM
TKTVSEVAVYSLQDPEPRTRAEFLKYSRQLTLDPNTAHRKLHLSDGNRKVTRSTQAQRYP
DHPERFDRWTQVLCRESLSGTRCYWEVEWSGGDAFIGVTYKGINRKGGQYACVLGRNDIS
CSLYCSDSIYTARHNNKKIEIIAPYRRRIGVYLDFTAASLSFYGVSGDSMMFLHTFQTTF
TEPLYPGFWLPCVNSSVTICKLN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagaaatggcagaagcaaatattctagttggagaggaccactttagctgtcca
gtgtgcctggatatattgaagaacccagtcgctattccatgtggacacagttactgtatg
gggtgtattaagaactgctgggatcagactgatcatataggaatctacagctgccctgag
tgcagagagacctttacgccaaggccagttctgcgcagaaacaccatgctggctgaagtt
gtggagaaattaaagaagactggactcaagcctcctcctgctcagaattatgctagactt
ggagatgtacagtgtgatttctgcactgggagaaagttcaaagctgtaaaatcctgtttg
acgtgcctggcttcttactgtgaaacacatgtcaagccacactatgaagctgctgcattt
aagaggcacaaactggtcgatgcaactggaaatctggatcaaaagctttgtgctgaacac
cagaagatgttggatgggttctgcagaactgatcagatgtgcatttgctggttgtgtgct
gataaaaaacacaagagccacgacacagtctcagctgacacagaaagaacagcgaaacag
aagcagctgagagaggctcaggcagaactacaacagagaatcttggagagactgaaagaa
ttgggggagctgaaacaggctgtgcacttactgaaaagcacagcacagacagaaataaag
gaaagtaagatgatatttactgcgctaatccgatccattaagagagtccgcgctgaggtt
cttgtgctgatagaagctaatgagaaggcttcagtgaatcaggctgaaggactcataaag
agactggagcaggagattgatgcgctgaggaggagaaacgctgagctgaaacagctttca
gaaacagaggatcacatccattttctacagaatttccaggctctctgtgcccctcctgta
actggagatttacccagcgttactgtcaatccaaacatctcttctgggcctattaggaaa
gttgtggctgaacttaaggaacatattgaggacttctgcaagggggaattaagcaaaatg
actaaaacagtgagtgaagttgcagtttacagtctacaggatccagagccaaggaccaga
gctgagtttttaaaatattcccgtcaactgacactggaccccaacacagcgcatagaaaa
ctccatctgtctgacgggaacagaaaggtgacccgaagtacacaagcccagcgatatcct
gatcacccagagagatttgacaggtggacccaggtgctttgcagagagagtttgtctgga
actcgctgctactgggaggttgagtggagtgggggagatgcttttataggagtcacatat
aaaggaatcaacaggaaaggggggcagtatgcctgtgtccttggacgcaatgacatctcc
tgtagtttgtactgctctgattccatttatactgcccggcataataacaagaaaattgaa
ataattgctccctaccgccgtcgaataggagtgtatctggactttactgccgcctccctg
tcattttatggagtctctggggactcaatgatgttcctgcacacattccaaaccacattc
actgagccactctatcctgggttttggcttccttgtgtaaattccagtgtaacaatctgc
aagctgaactag
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integrated database retrieval system
