Acipenser ruthenus (sterlet): 117417116
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Entry
117417116 CDS
T07327
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arut01002
]
117417116
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117417116
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117417116
Enzymes [BR:
arut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117417116
Peptidases and inhibitors [BR:
arut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117417116
Ubiquitin system [BR:
arut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117417116
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117417116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
117417116
NCBI-ProteinID:
XP_033884821
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All DBs
Position
11:11361584..11396749
Genome browser
AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPRIGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQCVYMHLKRTFKEKATGASGGAIPQRRNGKVFLDLDLNCDFNGDDYEYEDEARL
VIFPDHYEIPLPNIEELPALVTIACDAILNAKSPYRRQEPDSWDDEIQVSKHASGLRQLD
NGVRIPPSGWKCSKCELRENLWVNLTDGSVLCGKWFFDGNGGNGHALEHYRETNYPLAVK
LGTITPDGADVYSFDEEEAVLDPHLAEHLAHFGIDMLQMQKTENGFTDSGVSPRISEWEV
IQESGSKLKPVYGSGYTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIFDYSPLDP
TQDFNTQMAKLGHGLLSGQYSKPPVKSELIEQVIKEEHKHQQKGISLKMFKALTSKGHPE
FSSSRQQDAQEFFLHLINQVERNSEGSENPSDVFRFLVEERTQCCQSRMVRYTQRADNIM
QLPAPMEAAVNKEELIAYEAKRQEAEVSRRSPPPAVRARIPFSACLQAYTEPENVDDFWS
SALQAKSAGVKTSRFKSFPEYLVIQIKKFTFGLDWVPKKLDVSIEMPDLLDITHLRATGL
QPKEEELPDIAPPIVVPDEPKDHLMNNFMDSPEIDESAVMQLAEMGFPLEACRKAVYYTG
NMGAEVAFNWVIAHMEEPEGNSNRNPGSNQQQDFAEPLVVAGFSEIDSSLSAAVPVADNQ
PPEESVAILTSMGFPRYQALQGLKATNNNLEHALDWIFTHPDSEEESEAASDIADPEGNA
NASASANATADNEPNGPRVRDGPGRYELFAFISHMGRSTMCGHYVCHIKKEGRWVIYNDH
KVCLSERPPKDLGYIYFYHRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggggagctgctagtcccttttatgcccacgatcagagtccctaga
ataggggacagggtattcaagagtgaatgtgccttttcctacgattctccagaatcagaa
ggtggcctgtatgtgtgcatgaacacttttttaggatttggacgggaacatgttgaaaga
cactatcgaaaaacaggccagtgtgtgtacatgcatctgaaacgcaccttcaaagagaaa
gccacaggtgcctctgggggggctataccacagagaagaaatggaaaagtatttttagat
ttagacctgaactgcgactttaatggggacgattacgaatacgaagacgaagccaggctt
gtcatatttccagaccactatgagatccccttaccaaatattgaagagttgcctgcactg
gtgactatagcgtgtgacgcgatactcaatgccaaatctccctacagaaggcaggagcct
gattcgtgggatgatgaaattcaggtctcgaaacacgccagcggcttaagacagctggac
aacggggtcagaataccacccagtggctggaaatgctccaagtgcgagcttcgggagaac
ctgtgggtgaacctgacggatggctcggttttgtgtgggaagtggttcttcgatggcaac
ggaggaaacgggcacgctctggagcactaccgggaaacaaactaccccctggccgtcaaa
ctgggaaccatcacccccgatggagcagacgtgtattcgtttgatgaagaggaggcagta
cttgacccccatttagcagaacacttggcacactttgggattgatatgcttcaaatgcaa
aagacagagaacggcttcacagacagtggtgtcagcccgcggatcagtgagtgggaggtg
atccaggagtcagggtcgaagctcaaacctgtgtacggctccggttacactggtatcaag
aacctgggaaacagctgctacctcggaaccaccatgcaggtcctcttcagcatccctgaa
ttccagcgagcgtatgttggcaatctccagcggatatttgactattcacctcttgatccc
acacaggatttcaacacgcagatggcaaagctgggccatggtcttctttcaggccagtac
tccaaaccaccagtgaaatcagagctcattgaacaggtgatcaaagaagaacacaagcac
cagcagaaagggatttccctaaagatgttcaaagccttgacaagtaaaggccacccggag
ttctcttccagcagacagcaagacgcacaggagttcttccttcacttgataaaccaggtg
gagagaaacagcgaaggctcagagaatcccagtgatgtgttccggttcctggtggaagaa
cgaacccagtgctgtcagtccagaatggtccgatacacgcagcgcgctgacaacatcatg
caacttcctgcgcccatggaagctgcagtaaacaaggaggagttaatagcctatgaagcg
aaacgtcaggaggctgaagtgagcaggagatcgcccccgccagcggtccgggccaggatt
ccattcagtgcctgtttgcaggcctacacagagccggagaacgtggacgacttctggagc
agtgctctgcaggccaagtctgctggagtcaaaacatctcgctttaaatcatttcctgaa
tacttggttatacagataaagaagtttacctttgggttggactgggtgcctaagaaatta
gatgtttctatagaaatgccagacttgctggacatcactcacctccgtgccactgggtta
cagccaaaagaggaggagcttccagacattgctccgcccattgttgttccagatgaaccc
aaagatcatttgatgaataatttcatggactctccagaaatcgatgagtctgcagtgatg
cagctcgctgaaatgggcttccccctcgaagcctgtcgcaaggcggtttactacacagga
aacatgggggctgaagtggccttcaactgggttatagcccacatggaggagcccgaagga
aacagtaacagaaaccctggaagtaatcagcagcaggactttgctgagccgttggtggtt
gctgggtttagtgagattgactcttcattgtcggcagcggttcctgtggctgacaaccag
cctccagaggagagtgtagccatccttacatccatgggctttcccaggtaccaggccttg
cagggcctgaaggcaacgaacaacaatctggagcatgcgttagactggatctttactcac
ccagacagtgaagaggagagtgaggcagcctcagacatcgctgatccagagggcaatgcc
aacgccagtgccagtgccaacgccacagccgacaatgagccaaatggaccgcgggttagg
gatgggcctggcagatacgagctgtttgccttcattagccatatgggaagatccacaatg
tgtggccactatgtgtgtcacatcaaaaaggagggaagatgggtaatctacaatgaccac
aaagtatgtctgtcagaaagaccccccaaagacctgggctacatctacttttaccaccgg
atacccagctag
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