Acipenser ruthenus (sterlet): 117418161
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Entry
117418161 CDS
T07327
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117418161 (rbfox1)
Spliceosome [BR:
arut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117418161 (rbfox1)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SPESP1
Motif
Other DBs
NCBI-GeneID:
117418161
NCBI-ProteinID:
XP_033886696
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All DBs
Position
13:complement(28422119..29202955)
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AA seq
480 aa
AA seq
DB search
MANYSINAEDAIRGTTKDVKLRREDAEDSQPEAKRVRLGNSEEGISVNETEMQCSMNGGQ
PIQRSEETRVQPSADVKTALVSLPASKHQDPKADCSGCINKEDSTIPRQQMSCDREQLRG
NQDATAPPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQ
THTEQSGPDANTQTVSGTATQTDDAAQTEGQQQTQSSENSENKTQPKRLHVSNIPFRFRD
PDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN
ATARVMTNKKPINPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATAAAAYRGAHLRGRGR
TVYNTFRPAAPPPPIPAYGGVVYQDGFYGADIYGGYTAYRYAQPATATAAAYSDSYGRVY
AADPYHHTLAPAATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactattccatcaacgcggaggacgcgattcgagggacaaccaaggatgttaag
ctgaggagagaggacgctgaagattctcagcccgaagctaagagagttagactggggaac
agcgaagagggaatcagtgttaacgaaacagagatgcaatgtagtatgaatgggggtcag
ccgatacagagatcagaagagacccgagtccaaccaagtgctgatgtaaaaactgcactg
gtgagtctacctgcaagcaagcaccaggatcctaaagctgattgtagcggctgcataaat
aaagaagacagcacaattccaagacagcaaatgagctgtgacagagagcaactaaggggt
aatcaggacgctacagcacctccggacacgatggcacagccttacgcttcagcccagttc
gcacccccccagaacggcatccctgccgagtacacagctccccacccccatcccgcgcca
gactacacaggccagactacagtccctgagcacacactaaacatgtaccctcctgcccag
acgcacaccgaacagagtggccctgacgcaaacacacagactgtctctggcactgccaca
cagacggatgatgcagcacagactgaaggccagcaacagacacagtcctctgaaaactca
gaaaacaagacacagcccaagcggctccacgtttcaaatatccccttcagattcagagat
ccagacctcaggcagatgtttggccaatttggtaaaatattagatgttgaaattatcttt
aatgagcgcggatcgaagggatttggtttcgtaactttcgaaaatagtgctgatgcggac
agagcaagagagaaattacacggcactgtggtagagggccgtaaaatagaggttaataat
gccacagcccgagtaatgacaaacaaaaagcctatcaacccttatgcaaatggctggaag
ttgaatccagtggtgggtgcagtctacagcccagaattctatgcagtgccaggcttccca
tacccagctgcaactgcagccgctgcctacagaggagctcacctaagaggccgggggcgc
acagtctacaacaccttccgaccagctgcaccccctccccccatcccagcctacggaggt
gttgtataccaggatggattttatggtgcagacatttatggtggttacactgcctaccgg
tatgctcagcctgccactgcaactgcagctgcctacagtgacagttacggacgagtttat
gctgcagacccctaccaccacacacttgctccagcagccacctacagcgttggtgccatg
aatgcttttgcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctc
gttctttcttcattgcaggctagtatataccgagggggatacagccgttttgctccatac
taa
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