Acipenser ruthenus (sterlet): 117421090
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Entry
117421090 CDS
T07327
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arut03400
]
117421090
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117421090
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_29
AAA_13
AAA_21
FtsK_SpoIIIE
AAA_25
Motif
Other DBs
NCBI-GeneID:
117421090
NCBI-ProteinID:
XP_034777744
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Position
1:76409494..76507009
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AA seq
1047 aa
AA seq
DB search
MATVGKRKRDVSSELTNINNNNENTLIRSPEPGPGDSTQKLQFVEGSIVRIKMYNFLTYD
FCEVYPGPNLNMIVGANGTGKSSVVCAICLGLAGKTSFIGRGDKIGLYVKRGCNKGSIEI
ELYKPDGNLVITREIQVENNQSMWAINGKHATQKNVEEKVAALNIQVGNLCQFLPQEKVG
EFAKMSKIELLEATEKSIGPPEMYRFHCDLKNFRSKERELENLCKEKSSFLEKMKQRNER
YKQDVERYYERKRHLDMINMLERKKPWVEYETVRKQYEGTKNERDQVKKDLKKLKDDQAP
MLRKIQAFDRQIEVIEKKMKDKALDIKETSQKYKQKQDMLDRKDREIEDIQQALNLKRDE
ETDRQKRINNTRRMIKDWQSELSSIGDLDHVQPQIDSINCQLRQIQEEKASADGERTDLK
RERDNQESERRSMEPFSFFFFFKINYACIRVKDPRSAKFIENHIPLNDLRAFVFQKQEDM
EIFLKEIRDTQKLRVNAVLAPAQSCANRPPPRPIECLQRYGFYSFLRELIDAPEEVMSYL
CHQYRLNEVPVGTEKTKAMIETVIRESQLRQFYTAEEKYIVKKSNYTNKTISSNSALRHP
QFLTLTVDADERRQLEEQLKTIQQKMQTLDSQMKALSERQNVLDRRDNELRTQKKDLSEL
KGKKRQLEQKISTKQDSLKQMEQYDINLQEEEERTKAKIKAVNVQKVKLVSELMLLIKDC
ATLNMEKVNLSLESTELNAQKSKLETDCREGSSQLKNMEKQYTELENRKLSLKENCKALL
KKAKDMCNLDPGKNAVPQELQSGFRKLPDTLDEIDALLHEERSRASCFTGLNASVVDEYT
KRTQEIENLAKELEEKKTELNNYRQNISQVKERWLNPLKQLVEQINEKFGDFFSSMQCAG
EVDLHSENEEEYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMSLQELNRCP
FRVVDEINQGMDPINERRVFEMVVRTACKGTTSQYFFITPKLLQNLTYADEMTVLCVHNG
VHMLPPSKWNLKAFYRRRQRFQRMLAQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtaggaaaaaggaagcgagacgtcagctctgaactcacaaatataaataat
aacaatgaaaacactttaatcagatcacctgaacctggtccaggagacagcacacaaaaa
ctgcagtttgtggaaggatccatagttcggattaaaatgtacaacttcctaacatatgac
ttctgcgaggtgtatccaggaccaaatttaaacatgatcgtgggagctaatggtacaggg
aaatcgagcgtagtttgtgcaatctgtttgggtctagccggaaagacttccttcattgga
agaggcgataaaattggactttatgtgaagcggggatgcaacaaaggcagcattgaaatt
gagctttacaagcctgatgggaaccttgtgattactcgagaaattcaagttgaaaacaat
cagtcaatgtgggcgatcaatgggaagcatgcaactcagaaaaatgtggaagaaaaggtt
gctgcgcttaatattcaagtgggcaacctttgtcaattcttgcctcaggagaaagttggg
gagtttgcaaaaatgtcaaaaattgaactgcttgaagcgactgagaagtcaattgggcct
ccggagatgtacaggtttcactgtgatttaaaaaacttccgttcaaaggagagggagcta
gagaatttgtgcaaagagaaatccagtttcctggagaaaatgaagcagagaaatgagcgg
tacaaacaagacgtggaacgttattacgagaggaaacggcacttggatatgatcaacatg
ctggagaggaaaaagccttgggtggaatacgaaactgttaggaagcagtatgaaggtacg
aagaatgagcgcgaccaggtgaaaaaagatttgaaaaagttaaaagatgaccaggcaccg
atgctacgcaaaatccaggcttttgacaggcaaattgaagtcattgagaagaagatgaag
gacaaggctttggatatcaaagaaacatcacaaaagtataagcaaaaacaagacatgctg
gatcgtaaggacagagagattgaagatatacagcaggcactgaatcttaagcgggacgaa
gagacggaccggcagaagaggattaataacacgcgacgcatgatcaaggactggcagagc
gaactgagcagcatcggagacctggaccacgtgcagcctcagatagatagcatcaactgc
cagctgcggcagattcaagaggagaaggccagtgctgacggggagcgcacagacctgaag
agagagagggacaaccaggagagtgagaggagaagtatggaacctttttctttctttttt
ttttttaaaataaattatgcttgtatacgtgtgaaagatcctagaagtgcaaagtttatt
gagaaccacattccacttaatgatctcagggcctttgtatttcaaaaacaagaagatatg
gaaatattcctgaaggagatacgtgacacccagaaattaagggtaaatgctgtcctcgca
cctgcccagtcatgtgcaaacaggccgccaccaagaccaatcgagtgcttgcagcgttac
ggattttactcattcttgcgagagctgattgatgccccggaggaggttatgagctatctc
tgccaccagtacagattgaacgaggttccagttgggactgagaagaccaaagcaatgatt
gaaacagttataagagagtcccagctgagacagttttacacagcagaagagaaatatatt
gtgaaaaagtccaactacaccaacaagacaatttccagtaactctgctctgcgccaccct
cagttcctcacattgactgtggatgctgatgaaagaaggcagcttgaggaacaactaaag
acgattcaacaaaagatgcagacattggattcacaaatgaaggccctgtcggaacgtcag
aatgtgctggatcgtagggacaatgagctcagaacgcaaaagaaagacctgtctgagctg
aagggaaagaaaaggcaactggaacagaaaattagcaccaaacaagacagtttgaagcag
atggaacagtatgacatcaatctacaagaagaagaagaacggacgaaagcaaagataaag
gcagtcaatgtccagaaagtcaagcttgtatccgaactcatgctgcttataaaagactgt
gcaacactgaacatggagaaggtgaacctgtctcttgaaagtactgagctaaatgcccag
aagagcaaactagaaacagattgcagagaagggtcttcacaactgaaaaatatggagaaa
cagtacacagagttggagaacagaaagctttcactgaaggagaactgcaaggcattgctg
aagaaagcaaaggacatgtgtaatctggatccaggcaagaatgctgttccacaggagctc
cagtctgggttccgtaagcttccagatactctggatgaaatagatgctttacttcatgag
gagagatcaagagcctcctgcttcactggcttaaacgcttcagttgttgatgagtacaca
aagaggactcaggaaattgagaatttagcaaaagaactagaagaaaagaaaactgaatta
aataattacaggcagaatatttcccaggtaaaagaaaggtggttaaatccactgaaacag
cttgtagagcaaatcaatgagaagtttggtgatttcttcagttccatgcagtgtgctgga
gaggtggacctacattcagaaaacgaggaggaatatgacaagtatggaattcgcattcga
gttaagtttcgcagcagcacccagctccatgagctcactccacatcatcagagcggaggc
gagcgcagtgtttccaccatgctgtacctgatgtctctgcaggagctcaaccgctgccct
ttccgagtagtggatgaaattaatcagggtatggacccaatcaatgaacggcgagttttt
gaaatggtggtgcgcacagcttgcaagggaaccacttctcagtacttctttattacaccc
aagctgctgcagaatctgacatatgctgatgagatgactgtcctgtgcgttcacaatggg
gtacacatgctgcctccttccaaatggaacttaaaagctttctacagaagacgacagcga
tttcagcggatgttggcccagtga
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