Acipenser ruthenus (sterlet): 117422290
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Entry
117422290 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117422290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117422290
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117422290
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117422290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-B_box
Baculo_IE-1
zf-RING_11
zf-C3HC4_4
Prok-RING_4
zf-RING_4
zf-RING_10
STAT_alpha
FYVE
Motif
Other DBs
NCBI-GeneID:
117422290
NCBI-ProteinID:
XP_033892993
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All DBs
Position
16:10037262..10040631
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AA seq
648 aa
AA seq
DB search
MATAAILDPDIIREVLECSICMETFNQDQLRPKLLQCGHTVCRQCLEKLLASTINGVRCP
FCSKVSRMSNISQLADNLTVLKIIDSASSSATMCLMCKVCRNRLPKQYCQVCRLVLCDAC
KTEGHEQQGHPVLAIHAAAEHRRRDVGEKLSALRQMMQDIQKKKSALDGVFRKLRLKYKS
VQQDYAKAELGLQDELTKSRMAFSSSLSEIEKLNNQVLEEQTYLLNLAEVQLVSRCDYLT
MKIKQADLALLEEAVDEEELDLKCNLPVLLKLQEPELVQAEHLEPLGVGQVRRNQVTVNT
EEDYQEQAESSFSLYRDVDMVAEKACSLTASPSFKPKLVEPGASGSQQCQFIKKMGCKGN
LPGMFNLPVSLCVTMQGEVLVADRGNYRIQIFNRKGFQKEIRRSPSSIDNFVLSFLGADL
PNLIPLSIAINNQGLIGVTDNYDNSVKVYTPDGHCVACHKNQLIKPWGIAAMPSGQFVVT
DVEGGKLWSLSVDRSVGVVNYSRLCSAVRPKFVTCDSSGTVYFTQGLGLNIENRHNEHQL
EGGFSIGSVGTDGQLGKQLSHFFSENEDFRCIAGMCVDSRGDLLVADSGRKEILHFPKEG
SFSVLIQEGLTCPVGLAITPKGQLLVLDCWDHCVKVYNYHPRRQSCTD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcagcaatccttgacccagatatcatcagggaggtcctggaatgctcaatc
tgcatggagactttcaatcaggaccagttacgacccaaactcctgcagtgtgggcatact
gtgtgcaggcaatgcctggagaagctgcttgcaagcaccatcaacggagtgcgctgcccc
ttctgcagcaaagtgtccaggatgagtaacatctcgcagcttgctgacaatttgactgtc
cttaaaatcattgactctgcaagctcaagtgcaacaatgtgtttgatgtgcaaagtgtgc
aggaacagactaccaaagcagtactgccaggtgtgcagactggtgctgtgtgatgcctgc
aaaactgaggggcacgagcagcaaggccaccctgtacttgccatccacgctgcggccgag
catcgcaggagagacgtgggggagaagctctctgctttgcggcagatgatgcaggatata
cagaagaagaaatctgctctggatggagtcttcagaaaactgaggttaaagtacaaatcc
gtgcagcaggactatgctaaagctgagcttggattacaggacgagctgacaaagtctcgc
atggctttttccagttccttgtcagaaatcgaaaaactcaacaaccaggttctcgaggaa
cagacctatcttttaaacctggcggaagtccagttggtatcgagatgtgactatctcacc
atgaaaataaagcaggcagatcttgctctgctggaagaggccgttgatgaggaggaactg
gatttgaagtgcaaccttcctgtgcttctgaagctgcaggagcctgaactggtccaagct
gaacacctggagcctctgggtgtgggacaggtcagaagaaaccaggtcactgtgaacacg
gaagaggattaccaggaacaggcagaatcttcattcagtttgtatcgagatgttgacatg
gtggctgaaaaagcgtgctctttgacagcatcgcccagcttcaaaccaaagcttgtggag
ccgggagcttctggatcacagcagtgccagttcattaagaaaatgggctgcaaaggcaat
ctgcctggtatgtttaatctccctgttagcttgtgtgttacaatgcaaggggaggtgctc
gtggctgatcgtggaaactacagaattcagattttcaatcggaagggcttccaaaaagaa
atccgacgaagcccgagcagcattgacaattttgttctcagttttcttggggcagatctt
ccgaatttgataccactgtctatagccattaacaatcagggactgatcggcgtcacagat
aactatgacaattcagtgaaggtatacacacccgacggccactgtgtagcatgccacaag
aatcagctgattaaaccgtggggcattgcagcaatgccttcaggacagtttgtggtcacg
gacgtggaagggggtaagttgtggagtctctctgtggatcgcagtgtgggggttgtgaac
tatagcaggctgtgttcagctgtccgccccaagtttgttacctgtgacagcagcgggact
gtgtatttcactcagggtctgggattaaacattgagaacaggcacaacgagcatcagctg
gaagggggcttttccattgggtctgtgggtactgatggacaactgggcaaacaactgagc
catttcttctcagaaaacgaggacttccgctgcatcgctggaatgtgtgtggattccagg
ggagatctactggtcgcagacagcggtcgtaaagagattttgcactttcccaaagaaggg
agtttcagtgtcttgatccaagaagggctaacgtgtcctgttggtctggccataactcct
aaaggccagctgttggtgttggattgctgggaccactgtgtaaaagtgtataattatcac
ccaagaagacagtcttgtacagactag
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