Acipenser ruthenus (sterlet): 117431320
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Entry
117431320 CDS
T07327
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117431320
09122 Translation
03013 Nucleocytoplasmic transport
117431320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117431320
03041 Spliceosome [BR:
arut03041
]
117431320
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117431320
Spliceosome [BR:
arut03041
]
Complex C
Other components
EJC/TREX
117431320
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117431320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
PD40
Coatomer_WDAD
Nup160
Cytochrom_D1
DPPIV_N
IKI3
Motif
Other DBs
NCBI-GeneID:
117431320
NCBI-ProteinID:
XP_033908020
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All DBs
Position
15:complement(15201247..15204848)
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AA seq
322 aa
AA seq
DB search
MASQYYQEMQDSFRNNNKSREFAAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTSPDIFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKSHRSRAEEQFKFEVNEISWNNDNDMFYLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKKPLLAYACDDK
DGKYDSNREAGTVKLFGLPNDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtactaccaggagatgcaggatagcttcagaaacaacaataagagccga
gaattcgcggctcactccgccaaggtgcactcggtcgcttggagctgcgacggcaggaga
ttggcttcgggctcctttgataaaactgccagtgtgttcgtgttagagaaagaccggctg
gtgaaggagaacaactatagaggccacggggacagcgtggatcaactttgctggcatccg
actagtccagacatcttcgtcacagcctcgggagacaaaactatccgcatctgggacgtg
cggactacaaaatgcattgcaacagtcaacaccaaaggggagaatatcaatatctgctgg
agcccggacggacagaccatcgctgttgggaacaaagatgacgtggtgaccttcattgat
gccaagagccaccggtcccgtgcagaggagcagttcaaattcgaggtgaacgagatctcc
tggaacaatgacaatgacatgttctacctgaccaatggtaacggctgcatcaacatcctc
agctaccctgaactgaagcccattcagtccattaatgcccatccttccaactgtatctgt
atcaagtttgacccaactgggaagtactttgctacaggcagcgcagacgccctggtcagc
ctgtggaatgtggaagagctggtctgtgttcgctgcttctccaggctggactggcctgta
aggaccctgagcttcagtcatgatggtaagatgctggcctcggcatcagaggaccacttc
atagacattgcggaggtggaaacaggtgagaagctatgggaagtgcagtgcgagtctccg
actttcacagtggcctggcatcccaagaaacctctgcttgcatatgcctgtgatgacaag
gacgggaaatacgacagcaaccgtgaggcaggcaccgtcaagctcttcggcctgcccaat
gactcgtaa
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