KEGG   Acipenser ruthenus (sterlet): 117431320
Entry
117431320         CDS       T07327                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03013  Nucleocytoplasmic transport
arut03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117431320
  09122 Translation
   03013 Nucleocytoplasmic transport
    117431320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:arut03019]
    117431320
   03041 Spliceosome [BR:arut03041]
    117431320
Messenger RNA biogenesis [BR:arut03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117431320
Spliceosome [BR:arut03041]
 Complex C
  Other components
   EJC/TREX
    117431320
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117431320
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Nup160 Cytochrom_D1 DPPIV_N IKI3
Other DBs
NCBI-GeneID: 117431320
NCBI-ProteinID: XP_033908020
LinkDB
Position
15:complement(15201247..15204848)
AA seq 322 aa
MASQYYQEMQDSFRNNNKSREFAAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTSPDIFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKSHRSRAEEQFKFEVNEISWNNDNDMFYLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKKPLLAYACDDK
DGKYDSNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcttcccagtactaccaggagatgcaggatagcttcagaaacaacaataagagccga
gaattcgcggctcactccgccaaggtgcactcggtcgcttggagctgcgacggcaggaga
ttggcttcgggctcctttgataaaactgccagtgtgttcgtgttagagaaagaccggctg
gtgaaggagaacaactatagaggccacggggacagcgtggatcaactttgctggcatccg
actagtccagacatcttcgtcacagcctcgggagacaaaactatccgcatctgggacgtg
cggactacaaaatgcattgcaacagtcaacaccaaaggggagaatatcaatatctgctgg
agcccggacggacagaccatcgctgttgggaacaaagatgacgtggtgaccttcattgat
gccaagagccaccggtcccgtgcagaggagcagttcaaattcgaggtgaacgagatctcc
tggaacaatgacaatgacatgttctacctgaccaatggtaacggctgcatcaacatcctc
agctaccctgaactgaagcccattcagtccattaatgcccatccttccaactgtatctgt
atcaagtttgacccaactgggaagtactttgctacaggcagcgcagacgccctggtcagc
ctgtggaatgtggaagagctggtctgtgttcgctgcttctccaggctggactggcctgta
aggaccctgagcttcagtcatgatggtaagatgctggcctcggcatcagaggaccacttc
atagacattgcggaggtggaaacaggtgagaagctatgggaagtgcagtgcgagtctccg
actttcacagtggcctggcatcccaagaaacctctgcttgcatatgcctgtgatgacaag
gacgggaaatacgacagcaaccgtgaggcaggcaccgtcaagctcttcggcctgcccaat
gactcgtaa

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