Acipenser ruthenus (sterlet): 117432513
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Entry
117432513 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432513
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_6
zf-RING_5
Prok-RING_4
Nis1
MAP65_ASE1
DivIC
CdvA
DUF5764
Y1_Tnp
LRIM1_dimer
Motif
Other DBs
NCBI-GeneID:
117432513
NCBI-ProteinID:
XP_034766610
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Position
35:complement(5924305..5936551)
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AA seq
552 aa
AA seq
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MASNLWSEDQFSCSVCLELLKDPVAIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRKTFT
PRPDLGRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHVKTHYEGAAFKRHKLINAIGDLEQKLCAEHQKVLEVFCRTDQTCICLLCTQDEHKS
HDTVSAKKERSVKQKQLGETQTEIQQRIQERLKEIEEIKQTVETLKRSACIEIKESEKIF
TELIRSIKKIHTEVIELIGANEKAAVNQAEGRMKKLKQEIAELRRRNAELKQLSETEDHI
HFLQNIQSLCAPPEAGDLPSVTANTGSSFGAVRKAVSELKDHIEDFCKGELVKITKTVNE
VAVYSLQAPEPRNRAEFLKYSCQLTLDPNTAHINLCLSEGNRKVTCRRETQRYPDDHSER
FDVYPQVLCREGLSGTRCYWEIEWSGGGVSIGVTYKGISRKGVDRSCGLGCNDKSWSLVC
SGSSYTARHNNNKTAVTAPRSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLYP
GFRLYCYESSVC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagaggatcagtttagctgttcagtgtgtctggagctattg
aaggacccagtcgctattccatgtggacacagttactgtatggggtgtattaagaactgc
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagaaagacctttacc
ccaaggcctgatctgggcagaaacaccatgctggctgaagttgtggagaaattaaagaag
acaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacacacgtcaagacacactatgagggggctgctttcaagaggcacaagctgatc
aatgcaattggagatctggagcagaagctttgtgctgaacaccagaaggttttggaggtc
ttctgtagaaccgatcagacgtgtatttgcttgttgtgtacacaagatgaacacaagagc
catgatacagtctcagctaagaaagaaaggagtgtgaaacagaagcagctgggagagaca
cagacagaaatacaacagagaatccaggagagactgaaagaaattgaagaaataaaacag
actgtggagacactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatcttt
actgagctgatccgatccattaagaagatccacactgaggttattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactgaagcaggagatt
gctgagctaaggaggagaaacgctgagctgaaacagctttcagagacagaggatcacatc
cattttctacagaatatccagtctctctgtgcccctcctgaagctggagacttacccagc
gttactgccaatacaggcagctcttttggggctgtgaggaaagctgtatctgaacttaaa
gaccatattgaggacttctgcaagggggaattagtcaaaataaccaaaacagtgaatgaa
gttgcagtttacagtctgcaggctccagagccaaggaacagagctgagtttttaaaatat
tcctgtcagctcacactggaccccaacacagcgcatataaacctctgtctgtctgaaggg
aacagaaaggtgacatgcaggagagagacccagagatatccagatgatcactcagagaga
tttgatgtgtatccccaagtgctttgcagagagggtttgtctgggactcgctgttactgg
gagattgagtggagtgggggaggggtttctataggagtcacatataaaggaatcagcagg
aaaggagtggatcgttcctgtggccttggatgcaatgacaagtcctggagtttggtctgt
tctggttccagttacactgcccggcacaataacaataaaactgcagtaactgccccccgc
tcccccagaataggagtgtatctggactttaatgccggcacgctgtccttttatggcgtc
tctgacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctatcct
gggtttagactttattgttacgaatcctctgtatgttga
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