Acipenser ruthenus (sterlet): 117432641
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Entry
117432641 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432641
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
Nis1
zf-RING_6
zf-H2C2_2
DUF5764
DivIC
Fes1
CdvA
Motif
Other DBs
NCBI-GeneID:
117432641
NCBI-ProteinID:
XP_034774275
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MDTGASAPDPSKEKCEEEMKKQPEPRRRNSNEEDRPDMSGCEASAEEETGETEEQEPARI
AEANILVTNDQFSCPVCLEILKDPVTTACGHSYCMGCIKNCWDQTDHTGVYSCPQCRKTF
TPRPDLCRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLAS
YCETHVKPHYEGAAFKRHKLINAIGNLEQKLCAEHQKVLEVFCRTDQTCICLLCTQIEHK
SHDTVSAKKERSVKQKQLGETQTEIQQRIQERLKEIEEMKQAVATLKRSACIEIKESEKI
FTELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNTELKQLSETEDH
IHFLQNFQSLCAPPEAGDLPSVTVNTDISFGALRKAVSELKDHIEDFCKGELDKITTTVN
EVAVYSLQAPEPRNRAEFLKYSCPLTLDPNTANGQLCLSEGNRKVTWGRETQRYPDDHSE
RFDYYTQVLCREGLSGTRCYWEIEWSGGGVSIGVTYKGISRKGGDRSCGLGYNERSWSLE
CSGSSYTAQHNNNETTITAPPSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLY
PGFRLDYYDSSVTIC
NT seq
1847 nt
NT seq
+upstream
nt +downstream
nt
atggataccggagcctcagcgccggatccgtcaaaggaaaagtgtgaagaggaaatgaag
aaacagccagagcctcgacgaagaaacagtaatgaggaagaccgtcctgacatgtctgga
tgtgaagcgagtgcagaagaggaaacaggagagacagaggaacaagaaccagcaagaata
gcagaagcgaatattctggtaacgaatgaccagtttagttgtccagtgtgtctggagata
ttgaaggacccagtcactacagcatgtggacacagttactgtatggggtgtattaagaac
tgctgggatcagactgatcatacaggtgtctacagctgcccccagtgcagaaagaccttt
accccaaggcctgatctgtgcagaaacaccatgctggctgaagttgtggagaaattaaag
aagacaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgt
gatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctct
tactgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaagctg
atcaatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttggag
gtcttctgtagaaccgatcagacgtgtatttgcttgttgtgtacacaaattgaacacaag
agccatgatacagtctcagctaagaaagaaaggagtgtaaaacagaagcagctgggagag
acacagacagaaatacaacagagaatccaggagagactgaaagaaattgaggagatgaaa
caggctgtggcgacactaaaaagatctgcatgcatagaaataaaggaaagtgagaagatc
tttactgagctgatccgatccattgagaagatccacactgaggttattgagctgattgga
gctaacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggag
attgctgagctaaggaggagaaacactgagctgaaacagctttcagagacagaggatcac
atccattttctacagaatttccagtctctctgtgcccctcctgaagctggagacttaccc
agcgttactgtcaatacagacatctcttttggggctctgaggaaagctgtatccgaactt
aaagaccatattgaggacttctgcaagggtgaattagacaaaataaccacaacagtgaat
gaagttgcagtttacagtctgcaggctccagagccaaggaacagagctgagtttttaaaa
tattcctgtccgctcacactggaccccaacacagcgaatggacagctctgtctgtctgaa
gggaacagaaaggtgacatgggggagagagacccagagatatcctgatgatcactcagag
agatttgattactatacccaagtgctttgcagagagggtttgtctgggactcgctgttac
tgggagattgagtggagtgggggaggggtttctataggagtcacatataaaggaatcagc
aggaaaggaggggatcgttcctgtggccttggatacaatgaaaggtcctggagtttggaa
tgctctggttccagttacactgcccagcacaataacaatgaaactacaataactgccccc
ccctcccccagaataggagtgtatctggactttaatgccgggacgctgtccttttatggc
gtctctgacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctat
cctgggtttaggcttgattattatgattcctctgtaacaatctgcca
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