Acipenser ruthenus (sterlet): 117432652
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Entry
117432652 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432652
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432652
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_6
Prok-RING_4
zf-RING_5
DivIC
zf-C2H2
Fes1
Motif
Other DBs
NCBI-GeneID:
117432652
NCBI-ProteinID:
XP_034766623
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All DBs
Position
35:complement(8867228..8872713)
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AA seq
363 aa
AA seq
DB search
MAEANILVAHDQFSCSVCLEILKDPVAIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRKT
FTPRPDLCRNTMLAEVVEELKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLA
SYCETHVKPHSEGAAFKRHKLINAIGNLEQKLCAEHQKVLEVFCRTDQTCICLLCIVNEH
KSHDTVSAEAERSVKQKQLGETQTEIQQRIQERVKEIEEMKQAVESLKRSACIEIKESEK
IFTELIRSIEKIHTEVIELIGDNEKVVVNQAEGLIKKLEQEIAELSRRNAELKQLSETED
HIHFLQNFQSLCAPPEAGDLPSVTVNTDISFGAVRKAVSDLKDHIEDFCKRELVKITKTV
WGE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattctggtagcgcatgaccagtttagctgttcagtgtgtctggag
atattgaaggacccagtcgctattccatgtggacacagttactgtatggggtgtattaag
aactgctgggatcagactgatcatacaggtgtctacagctgcccccagtgcagaaagacc
tttaccccaaggcctgatctgtgcagaaacaccatgctggccgaagttgtggaggaatta
aagaagacaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagccacacagtgagggggctgctttcaagaggcacaag
ctgatcaatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttg
gaggtcttctgtagaaccgatcagacgtgtatttgtttgttgtgtattgtcaatgaacac
aagagccatgatacagtctcagctgaggcagaaaggagtgtgaaacagaagcagctggga
gagacacagacagaaatacaacagagaatccaggagagagtgaaagaaattgaggagatg
aaacaggctgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaag
atctttactgagctgatccgatcgattgagaagatccacactgaggttattgagctgatt
ggagataacgagaaagttgtagtgaatcaggctgaaggactcataaagaaactggagcag
gagattgctgagttaagcaggagaaatgctgagctgaaacagctttcagagacagaggat
cacatccattttttacagaatttccagtctctctgtgcccctcctgaagctggagactta
cccagcgttactgtcaatacagacatttcttttggggctgtgagaaaagctgtatctgac
cttaaagaccatattgaggacttctgcaagagggaattagtcaaaataactaaaacagtg
tggggggagtaa
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