Acipenser ruthenus (sterlet): 117432773
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Entry
117432773 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432773
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432773
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
LRIM1_dimer
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117432773
NCBI-ProteinID:
XP_034766693
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All DBs
Position
35:8632677..8672574
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AA seq
576 aa
AA seq
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MASNLWSEDQFSCSVCLELLKDPVTIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRETFT
PRPVLCRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDSCTGRKSKAVKSCLTCLASY
CETHVKPHYEGAAFKRHKLINAIGNLEQKLCAEHQRLCEVFCRTDRTCICVLCTVKEHKS
HDTVSAETERSVKQKQLGETQTEIQQRIQERLKETEELKQAVESLKRSACIEIKESEKIF
TELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNAELKQLSETEDHI
HFLQNFQSLCAPPKVGDLPSITVNTDISFGTVRKAVSELKDHIEDFCKGELVKITTTVNE
TAVYTLRSRSRDRRLKAKEAAVQSRQAPEPKTRADFLKYYCQLTLDPNTAHRELCLSEGN
RKVTRRREVQPYPDHPDRFDILYQVLCKEGLSGSPCYWEIEWSGREGVDIGVAYKGIDPK
GEDISFQLGHNNKSWKLFCCDSRYSAWQNNNASEVKLFRSPRIGVYLDFTAGTLSFYGVS
GDKMTPLHRFQTTFTEKLYPGFYIYSDSSVRVCKLK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagaggatcagttcagttgttcagtgtgtctggagctattg
aaggacccagtcactattccatgtggacacagttactgtatggggtgtattaagaactgc
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacctttacc
ccaaggcctgttctgtgcagaaacaccatgctggctgaagttgtggagaaattaaagaag
acaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
tcttgcactgggagaaagtccaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacacacgtcaagccacactatgagggggctgctttcaagagacacaagctgatc
aatgcaattggaaatctggagcagaagctttgtgctgaacaccaacgattatgtgaggtc
ttctgtagaactgatcggacgtgtatttgtgtgttatgtaccgtcaaggaacacaagagc
catgatacagtctcagctgagacagaaaggagtgtgaaacagaagcagctgggagagaca
cagacagaaatacaacagagaatccaggagagactgaaagaaactgaggagctgaaacag
gctgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatcttt
actgagctgatccgatccattgagaagatccacactgaggtgattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggaaatt
gctgagctaaggaggagaaacgctgagctgaaacagctttcagagacagaggatcacatc
cattttctacagaatttccagtctctctgtgcccctcctaaagttggggacttacccagc
attactgtcaatacagacatctcttttgggactgtgaggaaagctgtatctgaacttaaa
gatcacattgaggacttctgcaagggggaattagtcaaaataaccacaacagtgaatgaa
acagcagtttataccctgaggtctaggagccgtgacagacgtttaaaagcaaaagaagct
gccgttcaaagtcgacaggctccagagccaaagaccagagctgactttttaaaatattac
tgtcagctcacactggaccccaacacagcacatagagagctctgtctgtctgaagggaac
agaaaggtaacacgacggagagaggtccagccatatcctgatcacccagatagatttgac
atcttgtaccaagtgctttgcaaagagggtttgtctgggtctccctgctactgggagatt
gagtggagtggcagggagggggtagatataggagtcgcatataaaggaatcgacccgaaa
ggagaggacatttcctttcagcttggacacaataacaagtcctggaaattgttctgctgt
gattccaggtactctgcctggcagaataacaatgcatctgaagtaaaattattccgctcc
cccagaataggggtgtatctggactttactgccggcacgctatcattttatggagtctct
ggagacaaaatgacccccctgcacagattccaaaccacatttactgagaaactctatcct
gggttttatatttattctgattccagtgtaagagtctgcaagctgaagtag
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