Acipenser ruthenus (sterlet): 117432845
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Entry
117432845 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432845
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
Prok-RING_4
zf-RING_6
zf-RING_5
Nis1
CCDC92
LRIM1_dimer
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
117432845
NCBI-ProteinID:
XP_034766720
LinkDB
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Position
35:complement(7059019..7069507)
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AA seq
555 aa
AA seq
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MASNLWSENQFSCSLCLELLKDPVTIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRETFT
PRPVLGRNIMLAEVAGEFKRRRLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHVKPHSEVTPLKRHKLINAIGNLEQKLCAEHQKVLDIFCRTDQTCVCVLCTDKDHKS
HDTVSAEAERSVKQKQLGETQTEIQQRIQERLKETEEMKQAVESLKRSACIEIKESEKIF
TELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNTELKQLSETEDHI
HFLQNFQSLCVPPEAGDLPRVTVNTDISFGTVRKAVSELKDHIEDFWKGELVKITTTVNE
VAVYSLQTPEPRNRAEFIKYSYQLTLHPNTAYRELCLSEGNRKVTRRSETQRYRHHPERF
DSWPQVLCRERLSGTRCYWEIEWRGGGAYIGVTYKGISRKGGDRCCLLGCNDKSWSVYCS
DSSYSARHNNNKTAITAPCSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLYPG
FWIGYDSSVTICQLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagagaatcagtttagttgttcactgtgtctggagctattg
aaggacccagtcactattccatgtggacacagttactgtatggggtgtattaagaactgc
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacctttacc
ccaaggcctgttctgggcagaaacatcatgctggctgaagttgctggagaattcaagagg
agacgactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacacacgtcaagccacacagtgaggttactccattaaagaggcacaagctgatc
aatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttggatatc
ttctgcagaaccgatcagacgtgtgtttgtgtgttgtgtacagacaaggatcacaagagc
catgatacagtctcagctgaggcagaaaggagtgtgaaacagaagcagctgggagagaca
cagacagaaatacaacagagaatccaggagagactgaaagaaactgaggagatgaaacag
gctgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatcttt
actgagctgatccgatccattgagaagatccacactgaggttattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggagatt
gctgagctaaggaggagaaacactgagctgaaacagctttcagagacagaggatcacatc
cattttctacagaatttccagtctctctgtgtccctcctgaagctggagacttacccaga
gttactgtcaatacagacatctcttttgggactgtgaggaaagctgtatctgaacttaaa
gaccatattgaggatttctggaagggggaattagtaaaaataaccacaacagtgaatgaa
gttgcagtttacagtctgcagactccagagccaaggaacagagctgagtttataaaatat
tcctatcagctcacactgcaccccaacacagcatatagagagctctgtctgtctgaagga
aacagaaaggtgacacggaggagtgagacccagcgatatcgtcatcacccagagagattt
gatagctggccccaagtgctttgcagagagcgtttgtctgggactcgctgttactgggag
attgagtggagggggggaggggcttatataggagtcacatataaaggaatcagcaggaaa
ggaggggatcgttgctgtctccttggatgcaatgacaagtcctggagtgtgtactgctct
gattccagttattctgcccggcacaataacaataaaactgcaataactgccccctgctcc
cccagaataggagtgtatctggactttaatgctggcactctgtcattttatggcgtctct
gacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctatcctggg
ttttggattggttatgattcctctgtaacaatctgccagctgaactag
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integrated database retrieval system
