Acipenser ruthenus (sterlet): 117432894
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Entry
117432894 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432894
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432894
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
DivIC
Prok-RING_4
Nis1
zf-RING_6
DUF5764
MutS_III
Motif
Other DBs
NCBI-GeneID:
117432894
NCBI-ProteinID:
XP_034766706
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Position
35:5205196..5244263
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AA seq
562 aa
AA seq
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MAEANILVVHDQFSCSVCLELLKDPVAIPCGHSYCMGCIKTYWDQTNHTGVYSCPQCRET
FTPRPVLRRNTMLADVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLA
SYCETHVKPHYEGAAFKRHKLINAIGDLEQKLCAEHQKVLEVFCRTDQMCICLLCSQIEH
KSHDTVSAEAERSVKQKQLGETQREIQQRIQERLKQVEDLKQAVESLKRSACIEIKESEK
IFTELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNAELKQLSETED
HIHFLQNFQSLCAPPEAGDLPSVTVNTDISFGAVRKAVSELKDHIEDFCKGELVKITTTV
NEVAVYSLQAPEPRNRAEFLKYSCQLTLDPNTAHRELCLSEGNRKVTLRGETQRYPDHSE
RFDCYPQVLCREGLSGTRCYWEIECSGGGASIGVTYKGISRKGGDRSCVLGFNDKSWSLF
CSDSSYTARHNNNETAITAPHSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTAFTEPLY
PGFSFDWFDLFSGSSVTICQLN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattttggtagtgcatgaccagtttagctgttcagtgtgtctggag
ctattgaaggacccagtcgctattccatgtggacatagttactgtatggggtgtattaag
acctactgggatcagactaatcatacgggtgtctacagctgcccccagtgcagagagacc
tttaccccaaggcctgttctgcgcagaaacaccatgctggctgatgttgtggagaaatta
aagaagacaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaag
ctgatcaatgcaattggagatctggagcagaagctttgtgctgaacaccagaaggttttg
gaggtcttctgtagaacggatcagatgtgtatttgcttgttgtgttcacaaattgaacac
aagagccatgatacagtctcagctgaggcagaaaggagtgtgaaacagaagcagctggga
gagacacagagagaaatacaacagagaatccaggagagactgaaacaagtggaggatctg
aaacaggctgtggagtcactaaaaagatctgcatgcatagaaataaaggaaagtgagaag
atctttactgagctgatccgatccattgagaagatccacactgaggttattgagctgatt
ggagctaacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcag
gagattgctgagctaaggaggagaaacgctgagctgaaacagctttcagagacagaggat
cacatccattttctacagaatttccagtctctctgtgcccctcctgaagctggagactta
cccagcgttactgtcaatacagacatctcttttggggctgtgaggaaagctgtatctgaa
cttaaagaccatattgaggacttctgcaagggggaattagtcaaaataaccacaacagtg
aatgaagttgcagtttacagtctgcaggctccagagccaaggaacagagctgagttttta
aaatattcctgtcagctcacactggaccccaacacagcgcatagagagctctgtctgtct
gaagggaacagaaaggtgacactgaggggagagacccagagatatcctgatcactcagag
agatttgattgctatccccaagtgctttgcagagagggtttgtctgggactcgctgttac
tgggagattgagtgcagtgggggaggggcttctataggagtcacatataaaggaatcagc
aggaaaggaggggatcgttcctgtgtccttggattcaatgacaagtcctggagtttgttc
tgctctgattccagttacactgcccggcacaataacaatgaaactgcaataactgccccc
cactcccccagaataggagtgtatctggactttaatgccggcacgctgtccttttatggc
gtctctgacacaatgaccctcctgcacagattccaaaccgcattcactgagccgctctat
cctgggtttagttttgattggtttgatttgttttctggttcctctgtaacaatctgccag
ctgaactag
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