Acipenser ruthenus (sterlet): 117432934
Help
Entry
117432934 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432934
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_6
U-box
AIP3
Nis1
Prok-RING_4
zf-C2H2
MutS_III
DUF5764
zf-H2C2_2
Baculo_PEP_C
V_ATPase_I
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117432934
NCBI-ProteinID:
XP_034766559
LinkDB
All DBs
Position
35:complement(7380594..7401448)
Genome browser
AA seq
564 aa
AA seq
DB search
MAEANILVAEQQLLCAVCLEILKDPVAIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRKT
FTPRPDLRRNTILAEIAGEFKKRRLNPPPAQSYAGPGDVLCDFCIGRKFKAAKSCLTCLA
SYCETHVKPHYEGAVFKRHKLINAIGNLEQKLCAEHQKVLEVFCRTDQTCICMMCTQDEH
KSHDTVSAKKERNVKQKQLRETQTEIQQRIQERLKEIEELKQAVESLKRSAKREMKESKK
TFTELIQSIEKIHTEVIELIGAKEKAAVNQAEGLMKKLEQEIAELINRNAELRQLTEAED
HIHFLQKFQYLCAPPKAGDLPSVTVNTDISFGAVRKAVSELKDHIEDFCKGELVKITVEM
SHLIYMNEVAVYSLQAQEPRNRAEFLKYSCQLTLDPNTAYRELCLSEGNRKVTLRRETQR
YPDHPERFDSWPQLLCREGLSGTRCYWEIECSGELASIGVTYKGISRKGEYYSCGLGFND
KSWSLFCSGSSYTALHNIQGTAITAPGSPRIGVYLDFNAGTMSFYGVSDTMTLLHRFQTT
FTEPLYPGVWLHYYDSPVTICLLN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaaatattctggtagcagagcagcagttgttgtgtgcagtgtgtctggag
atattgaaggacccagtcgctattccatgtggacacagttactgtatggggtgtattaag
aactgctgggatcagactgatcatacaggtgtctacagctgcccccagtgcagaaagacc
tttaccccaaggcccgatctgcgcagaaacaccatcctggctgaaattgctggagaattc
aagaagagaaggctcaatcctcctcctgctcaaagttatgctggacctggagatgtgctg
tgtgatttctgcattgggagaaagttcaaagctgcgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagcctcactatgagggggctgttttcaagaggcacaag
ctgatcaatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttg
gaggtcttctgtagaaccgatcagacttgtatttgcatgatgtgtacacaagatgaacac
aagagccatgatacagtctcagctaagaaagaaaggaatgtgaaacagaagcagctgaga
gagacacagacagaaatacagcagagaatccaggagagactgaaagaaattgaggagctg
aaacaggctgtggagtcactgaaaagatctgcaaagagagaaatgaaggaaagtaagaag
acatttactgagctgatccaatcaattgaaaagatccacactgaggttattgagctgatt
ggagctaaagagaaggctgcagtgaatcaggctgaaggactcatgaagaaactggagcaa
gagattgctgagctaataaatagaaatgctgagctgagacagcttacagaggcagaggat
cacatccattttctacagaaattccagtatctctgtgcccctcctaaagctggagactta
cccagcgttactgtcaatacagacatctcttttggggctgtgaggaaagctgtatctgaa
cttaaagaccatattgaggacttctgcaagggggaattagtcaaaataaccgttgaaatg
tcccaccttatttacatgaatgaagttgcagtttacagtctgcaggctcaagagccaagg
aacagagctgagtttttaaaatattcctgtcagctcacactggaccccaacacagcgtat
agagagctctgtctgtctgaaggaaacagaaaggtgacactgaggagagagacccagcga
tatcctgatcatccagagagatttgacagctggccccaattgctttgcagagagggtttg
tctgggactcgctgttactgggagattgagtgcagtggggaattggcttctataggggtc
acatataaaggaatcagcaggaaaggagagtattattcctgtggtcttggattcaatgac
aagtcctggagtttgttctgctctggttccagttacactgccctgcacaatatccaagga
actgcaataactgcccccggctcccccagaataggagtgtatctggactttaatgccggc
acaatgtcattttatggcgtctctgacacaatgaccctcctacacagattccaaaccaca
ttcactgagccgctctatcctggggtttggcttcattattatgattcccctgtaacaatc
tgcctgctgaactag
DBGET
integrated database retrieval system
