Acipenser ruthenus (sterlet): 117432936
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Entry
117432936 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432936
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_5
zf-RING_10
Y1_Tnp
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
117432936
NCBI-ProteinID:
XP_034772558
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MAEANILVAHDQFSCPVCLELLKDPVTTACGHSYCMGCIKNCWDQTDHTGVYSCPQCRET
FTPRPVLRRNTMLAEVVEKLKKTGLKPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLA
SYCETHVKPHYEGAAFKRHKLINAIGNLEQKLCAEHQRLCEVFCRTDQTCICLLCTQGKH
RSHDTVSTETERTGKQKQLGETQTEIQQRIKERLKEVEKLKQAVKLLKRSTCIEIKENEK
IFTELIRSIEKIHIEVIELIGANKKAAVNQAEGRMKKLEQEIAELRRRNIEVKQLSETED
HIHFLQNFQPLCAPPEAGDLPSVTVNTDIYFGAVRKAVSELKDHIEDEAGRREQAAWRRA
LKREQRAGRRREIVYEVSVYSLQAPEPRNRAEFLKYSCRLTLDHNTAHKNLRLSEGNRKV
TQKRETQRCPDHSERFDYWPQVLCREGLSGTRCYWEIECSGGGASIGVTYKGIDRKGGDR
SCLLGCNDKSWSLFCSDSSFSAWHNNNHTAITAPRSHRIGVYLDFNVGTLSFYGVSDTMT
LLHRFQTTFTDLLYLGFRLDWFSDSTVTICQLN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattctggtagcgcatgaccagtttagctgtccagtgtgtctggag
ctattgaaggacccagtcactacagcatgtggacacagttactgtatggggtgtattaag
aactgctgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacc
tttaccccaaggcctgttctgcgcagaaacaccatgctggctgaagttgtggagaaatta
aaaaagacaggactcaaacctcctcctgctcaaagttatgctggacctggagatgtgccg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcttgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaag
ctgatcaatgcaattggaaatctggagcagaagctttgtgctgaacaccagcgattatgt
gaggtcttctgtagaactgatcagacctgtatttgcttgttgtgtacacaaggtaaacac
aggagccatgatacagtctccactgagacagaaaggactgggaaacagaagcagcttgga
gagacacagacagaaatacaacagagaatcaaggagagactgaaagaagtggagaagctg
aaacaggctgtgaagttacttaaaagatctacatgcatagaaataaaggaaaatgagaag
atctttactgagctgatccgatccattgagaagatccacattgaggttattgagctgatt
ggagctaacaagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcag
gagattgctgagctaaggaggagaaacattgaggtgaaacagctttcagagacagaggat
cacatccattttctacagaatttccagcctctctgtgcccctcctgaagctggagactta
cccagcgttactgtcaatacagacatctattttggggctgtgaggaaagctgtatctgaa
cttaaagaccatattgaggacgaagcagggaggagagagcaggcagcatggaggagagca
ttgaagagggagcagagagcagggaggagacgggagatagtgtatgaagtttcagtttac
agtctgcaggcaccagagccaaggaacagagctgagtttttaaaatattcctgtcggctc
acactggaccacaacacagcgcataaaaacctccgtctgtctgaagggaacagaaaggtg
acccagaaaagagagacccagcgatgtcctgatcactcagagagatttgactactggccc
caagtgctttgcagagagggtttgtctgggactcgctgttactgggagattgagtgcagt
gggggaggggcttctataggagtcacatataaaggaatcgacaggaaaggaggggatcgt
tcctgtcttcttggatgtaatgacaagtcctggagtttgttctgctctgactctagtttc
tctgcctggcacaataacaatcacactgccataactgccccccgctcccacagaatagga
gtgtatctggactttaatgttggcactctgtcattttatggagtctctgacacaatgacc
ctcctgcacagattccaaaccacattcactgacctgctctatcttgggtttagacttgat
tggttttctgattccactgtaacaatctgccagctgaactag
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