Acipenser ruthenus (sterlet): 117432940
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Entry
117432940 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117432940
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117432940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
AIP3
U-box
MobL
zf-RING_5
zf-RING_6
zf-RING_10
Nis1
FUT8_N_cat
LRIM1_dimer
Ran-binding
PMI_typeI_hel
PRP9_N
PTPA
Motif
Other DBs
NCBI-GeneID:
117432940
NCBI-ProteinID:
XP_034766689
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Position
35:8439302..8448148
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AA seq
568 aa
AA seq
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MAEANILVAHDQFSCSVCLQILKDPVAIPCGHSYCMGCIKNYWDQTDHTGVYSCPQCRET
FTPRPVLRRNTVLTEVVEKLKKTGLSPPPAQSYAGPGDVLCDFCTGRKFKAVKSCLTCLA
SYCETHVKPHYEGVAFKRHKLINTIENLEQMLCAEHQRVLEVFCRTDQSFICLLCTQDEH
KSHDTVSAEKERTGKQKQLVETQTEIQQRIQERLKEVEELKQAVESLKRSAKREMEESKK
TFTELIRSIEKIYIEVIKLIGAKEKAAVNQAEGFMKKVEQEIDELINKNAELKQLSETED
HIHFLQNFQSLCAPPEAGYLPSVTINPHISFGAVRKDVSELKDHIEDFCKGKLVKITKSV
NEVDVYSLQSPKPRNRAEFLKYSCQLTLDPNTAFKKLCLSEGNRKVTCRGETQQCPADHP
ERFDYWLQVLCREGLSGTRCYWEIEWSGIGADIGVTYKGISRKGENRSCVLGFNDKSWRL
FCSGSSYSAWHNNKETAITAPCSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPL
YPGFGLDFDDVDDGDDKSDSTVTICQLN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattctggtagcgcatgaccagtttagctgttcagtgtgtctgcag
atattgaaggacccagtcgctattccatgtggacacagttactgtatggggtgtattaag
aactactgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacc
tttaccccaaggcctgttctgcgcagaaacactgtgttgactgaagttgtagagaaatta
aagaagacaggacttagtcctcctcctgctcaaagttatgctggacctggagatgtgctg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagccacactatgagggtgttgctttcaagaggcacaag
ttgatcaacacaattgaaaatctggagcagatgctttgtgctgaacaccaaagggttttg
gaggtcttctgtagaaccgatcagtcatttatttgcttgttgtgtacacaagatgaacac
aagagccatgatacagtctcagctgagaaagaaaggacagggaaacagaagcagctggta
gagacacagacagaaatacaacagagaatccaggagagactgaaagaagtggaggagctg
aaacaggctgtggagtcactgaaaagatctgcaaagagagaaatggaggaaagtaagaag
acatttactgagctgatccgatcaattgagaagatctacattgaggttattaagctgatt
ggagctaaagagaaggctgcggtgaatcaggctgaaggattcatgaagaaagtggagcag
gagattgatgagctaataaataaaaatgctgagctgaaacagctttcagagacagaggat
cacatccattttctacagaatttccagtctctctgtgcccctcctgaagctggatattta
cccagcgttactataaatcctcacatctcttttggggctgtgaggaaagatgtatctgaa
cttaaagaccatattgaggacttctgtaaggggaaattagtcaaaataaccaaatcagtg
aatgaagttgatgtgtacagtttgcagtctccaaagccaaggaacagagctgaattttta
aaatattcctgtcagctcacactggaccccaacacagcatttaaaaagctctgtctgtcg
gaagggaacagaaaggtgacatgcaggggagagacccagcaatgtcctgctgatcaccca
gagagatttgactactggctccaagtgctttgcagagagggtttgtccgggactcgctgt
tactgggagattgagtggagtgggattggggctgatataggagtcacatataaaggaatc
agcaggaaaggagagaatcgttcctgtgtacttggattcaatgacaagtcctggagattg
ttctgctctggttccagttactctgcctggcacaataacaaagaaactgcaataactgcc
ccctgctcccccagaataggagtgtatctggactttaatgctggcactctatcattttat
ggcgtctctgacacaatgaccctcctgcacagattccaaaccacattcactgagccactc
tatcctgggtttgggcttgattttgatgatgttgatgatggtgatgataaatctgattcc
actgtaacaatctgccagctgaactag
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