Acipenser ruthenus (sterlet): 117433012
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Entry
117433012 CDS
T07327
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117433012
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117433012
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Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Prok-RING_4
DnaGprimase_HBD
zf-rbx1
zf-Nse
FAM195
COG5_C
U-box
CdvA
zf-RING_11
AceK_regulatory
Gig2-like
Motif
Other DBs
NCBI-GeneID:
117433012
NCBI-ProteinID:
XP_034766657
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Position
35:3094962..3113209
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AA seq
375 aa
AA seq
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MAAAASPGQLLEEQISCSICLDIFTSPVSTPCGHNFCTECIGRCWDQSDSIQCPLCKRKY
YRRPDLSINRVLAEISENFRQAKGSSSGESYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHVKPHYEIVTLKRHRLVSATRNLEQKLCKEHQRVLEVYCRTDGTSICWLCTEEEHRG
HDTVSAEKERVDKQKQLGETQTDIQQRIQERLKEVEELKQAVESVNRSEQRDMEVNQNIQ
AELIQFIETFWAEVTKEIDTKSRAAMKQAGGLVKKLEQEIAELRRRNAELKQLLETEDHI
QFLQEVQILPEPPDLKDLSSLTVNTETPASIANQAVSKLKHLIEDICKEELVNITRTVSE
AEVFTLVPGKRVEGV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctgcttcccctggtcagctcttagaagagcagatcagctgttcaatatgt
ctggatattttcaccagcccggtctccactccctgcggtcacaacttctgcacagagtgt
attggacgctgttgggatcagagtgatagtatccaatgcccgctctgtaagaggaagtat
tacaggagacctgatctcagcattaacagagtcttggctgaaatctcagaaaacttcaga
caagccaaggggagcagttcaggagaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacccacgtcaagccacactatgagattgtcacattgaagagacacagactggtc
agtgccactaggaatctggagcagaaactctgcaaggagcaccaacgggttttggaggtc
tactgccggactgatgggacttctatttgctggctgtgcactgaagaggaacacaggggc
catgatacagtctcagctgagaaggagagagttgacaagcagaagcagctgggagagaca
cagacagatatacaacagagaatccaggagagactgaaagaagtggaggagctgaaacag
gctgtggagagcgtgaatagatcagaacagagggacatggaggtgaaccagaatatccaa
gctgagcttatccaattcattgagactttctgggctgaggtgaccaaagagattgatacc
aagagcagagcagccatgaagcaggctggaggacttgtgaagaaactggagcaggagatt
gctgagctaaggaggagaaacgctgagctgaaacagcttttagagacagaggatcacatc
cagtttctacaggaagtccagattctccctgagcctccagatcttaaagacctctccagc
ttgactgtgaatacagagactcctgccagcattgccaaccaggctgtgtctaaacttaaa
cacctcattgaggacatctgcaaggaggaactggtgaacataaccagaacagtgagtgaa
gcagaagtgttcaccctggtacctgggaagagagtggagggcgtttag
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