Acipenser ruthenus (sterlet): 117433128
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Entry
117433128 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117433128
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117433128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
AIP3
zf-RING_10
zf-Nse
FUT8_N_cat
DUF5764
Baculo_PEP_C
Gp58
Nis1
MutS_III
BLYB
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
117433128
NCBI-ProteinID:
XP_034766537
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Position
35:complement(2048656..2060309)
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AA seq
555 aa
AA seq
DB search
MASNLWSEDQFSCPVCLEILKDPVTTACGHSYCMGCIKNYWDQTDHTGVYSCPQCRETFT
PRPVLRRNTMLAEVVEKLKKTGLNPPPTQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHIKPHSEVTPLKRHKLVNAIGNLEQKLCAEHQKVLDIFCRTDQTCVCVLCTDKEHKS
HDTVSAEAERTVKQKQLGETQTEIQQRIQERLKEVEDLKQAVETLKRSAQREMQESEKIF
SELIQSIEKIHTEVIELIGANEKAAVNQAEGLMKKLEQEIAELRRRNAELKELSETEDHI
HFLQNFQSLCAPLEAGDLPSVTVNTDISFGAVRKAVSELKDHIEDFFTGELVKITKTVNE
VAVYSLQAPEPRNRAEFINYSCQLTLDPNTAHRDLCLSEGNTKVTLRGKTQPYLDHPERF
DYWIQVLCKEGLSGTRCYWEIEWSGEGASIGVAYKGIGRKGDDDSFALGFNDKSWSLECD
DSSYTAWHNNNKTDISAPDSPRIGVFLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLYPG
FCLDYDSPVTICQLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagaggatcagtttagctgtccagtgtgtctggagatattg
aaggacccagtcactacagcatgtggacacagttactgtatggggtgtattaagaactac
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacctttacc
ccaaggcctgttctgcgcagaaacaccatgctggctgaagttgtggaaaaattaaagaag
acaggactcaatcctcctcctactcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacacacatcaagccacacagtgaggttactccattaaagaggcacaagctggtc
aatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttggacatc
ttctgtagaaccgatcagacttgtgtttgtgtgttgtgtacagacaaggagcacaagagc
catgatacagtctcagctgaggcagaacggactgtgaaacagaagcagctgggagagaca
cagacagaaatacagcagagaatccaggagagactgaaagaagtggaggatctgaaacag
gctgtggagacactgaaaagatctgcacagagagaaatgcaggaaagtgagaagatcttt
tctgagctgatccaatccattgagaagatccacactgaggttattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggactcatgaagaaactggagcaggagatt
gctgagctaaggaggagaaacgctgagctgaaagagctttcagagacagaggatcacatc
cattttctacagaatttccagtctctctgtgcccctcttgaagctggagacttacccagc
gttactgtcaatacagacatctcttttggagctgtgaggaaagctgtatctgaacttaaa
gaccatattgaggacttcttcacaggggaattagtcaaaataaccaaaacagtgaatgaa
gttgctgtttatagtctgcaggctccagagccaaggaacagagctgagtttataaactat
tcctgtcagctcacactggaccccaacacagcgcatcgagatctctgtctttctgaaggg
aacacaaaggtgacactgaggggaaagacccagccatatcttgatcacccagagagattt
gactactggatccaagtgctttgcaaagagggtttgtctgggactcgctgttactgggag
attgagtggagtggggaaggggcttctataggtgtcgcgtataaaggaatcggcaggaaa
ggagatgatgattcctttgcccttggattcaatgacaagtcctggagtttggagtgcgat
gattccagttacactgcttggcacaataacaataaaactgacataagtgcccccgactcc
cccagaataggagtgtttctggactttaatgccggcactctgtcattttatggagtctct
gacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctatcctggg
ttttgtcttgattatgattcccctgtaacaatctgccagctgaactag
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