Acipenser ruthenus (sterlet): 117433149
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Entry
117433149 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117433149
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117433149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
U-box
zf-Nse
Laminin_II
Nis1
CCDC92
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117433149
NCBI-ProteinID:
XP_034766648
LinkDB
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Position
35:complement(2756981..2766961)
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AA seq
556 aa
AA seq
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MASNLWSEDQFSCSVCLDILKDPVTTACGHSYCKGCIKNYWDQTDHTGVYSCPQCRETFT
PRPVLRRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHVKPHSEVTPLKRHKLVTAIGNLEQKLCTEHQKVLEVFCRTDQMCICALCTVKEHKS
HDTVSAETERTGKQKQLGETQTEIQQRIQERLNEAKELKQAVESLKRSACREIKESKKIF
TELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNTELKQLSETEDHI
HFLQNFQSLCAPPEAGDLPSVTVNTDISFGAVRKAVSELKYHIEDFCKGELVKITTTVNE
VAVYSLQAPEPRNRAEFLKYSCQLTLDPHTAHRNLCLSEVNRNVTHRKEILQYPDYPERF
DRWEQVLCREGLSGTRCYWEIEWSGGGADIGVTYQGISRKRGYDSCILGFNDKSWSLDYS
GSIYCARHNNNHIAITAPCYPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLYPG
FWLRYSDSSVTICQLN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtctgaggaccaatttagttgttcggtgtgtctggatatattg
aaggacccagtcactacagcatgtggacacagttactgtaaggggtgtattaagaactac
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacctttacg
ccaaggcctgttctgcgcagaaacaccatgctggctgaagttgtggagaaattaaagaag
acaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacccacgtcaagccacacagtgaagttactccattaaagaggcacaagctggtc
actgcaattggaaacctggagcagaagctttgtactgaacaccagaaggttttggaggtc
ttctgtagaactgatcagatgtgtatttgtgcattatgtaccgtcaaggaacacaagagc
cacgatacagtctcagctgagacagaaaggactgggaaacagaagcagctgggagaaaca
cagacagaaatacaacagagaatccaggagagactgaatgaagcgaaggagttgaaacag
gctgttgagtcactgaaaagatctgcatgcagagaaataaaggaaagtaagaagatcttt
actgagctgatccgatccattgagaagatccacactgaggttattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggagatt
gctgagctaaggaggagaaacactgaactgaaacagctttcagagacagaggatcacatc
cattttctacagaatttccagtctctctgtgcccctcctgaagctggagacttacccagc
gttactgtcaatacagacatctcttttggggctgtgaggaaagcagtatctgaacttaaa
tatcatattgaggacttctgcaaaggggaattagtcaaaataaccacaacagtgaatgaa
gttgcagtttatagtctgcaggctccagagccaaggaacagagctgagtttttaaaatat
tcctgtcagctcacactggacccccacacagcacatagaaacctctgtctgtctgaagtg
aacagaaatgtgacacacaggaaagagatcctgcaatatcctgattatccagagagattt
gacagatgggaacaagtgctttgcagagagggtttgtctgggactcgctgttactgggag
attgagtggagtgggggaggggctgatataggagtcacatatcaaggaatcagcaggaaa
agagggtatgattcttgtatccttggattcaatgacaagtcctggagtttggactactct
ggttccatttactgtgcccggcacaataacaatcacattgcaataactgccccctgctac
cccagaataggagtgtatctggactttaatgccggcactctgtcattttatggagtctct
gacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctatcctggg
ttttggcttcgttattctgattcctctgtaacaatctgccagctgaactag
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