Acipenser ruthenus (sterlet): 117433167
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Entry
117433167 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117433167
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117433167
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
XRCC1_N
zf-RING_6
U-box
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117433167
NCBI-ProteinID:
XP_034766655
LinkDB
All DBs
Position
35:complement(2418696..2456524)
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AA seq
555 aa
AA seq
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MASNLWSVEHLNCPVCLEILKGPVTIPCGHSYCIGCIKNCWDQTDHTGVYSCPECRETFT
PRPDLRRNTILAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASF
CETHVKPHYEVTPLKRHKLVNAIGNLEQKLCAEHQKVLDIFCRTDQTCVCVLCTDEEHKS
HDTVSAESERTWKQKQLGETQTEIQQRIWEGLKEVEELLNVGIDKRRSACIEIEESVKIF
IELIHSIEEINTEVIELIGANEKAAVNQAEGLMKKLEQDIAELRRRNAELKHLSEIAEHI
YFLQNFQSLCAPPEAGDLPSVTVNTDISLGAVRKAVSELQDKIEDFCKEELVKITKTVNE
VAVYSLQDPEPRNRAEFLKYSCQLTLNPNTAYRNLCLSEGNRKVTGKRETQPYPDHPERF
DNWSHVLCREDLSGTPCYWEIEWSGTGVYIGVTCKGISRKGLSDSCALGYNDKLWRLFCS
DSSYTARHNNNQSAITAPHSPRIGVYQDFNASTLSFYRVSNTMTLLHRIQTVFTEPVYPG
FGIHFDSTVTICQLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagtggagcacttgaactgtccagtgtgtctggagatattg
aagggcccagtcactattccatgtggacacagttactgtatagggtgtataaagaactgc
tgggatcagactgatcatacaggtgtctacagctgccccgagtgcagagagacctttacc
ccaaggcctgatctacgcagaaacaccatcctggctgaagttgtggagaaattaaagaag
acaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctctttc
tgtgaaacacacgtcaagccacactatgaggttactccattaaagaggcacaagctggtc
aatgcaattggaaatctggagcagaagctttgtgctgaacaccagaaggttttggatatc
ttctgtagaaccgatcagacttgtgtttgtgtgttgtgtacagacgaggagcacaagagc
catgatacagtctcagctgagtcagaaaggacttggaaacagaagcagctgggagagaca
cagacagaaatacaacaaagaatctgggagggactgaaagaagtggaggagttactgaac
gtgggtattgacaagaggagatctgcatgcatagaaatagaggaaagtgtaaagatcttt
attgagctgatccattccattgaggagatcaacactgaggtcattgagctgattggagct
aacgagaaggctgcagtgaaccaggctgaaggactcatgaagaaactggagcaagacatt
gctgagctaaggaggagaaacgctgagctgaaacacctttcagagatagcggaacacatc
tattttctacagaatttccagtctctctgtgcccctcctgaagctggagacttacccagc
gttactgtcaatacagacatctctttaggggctgtgaggaaagctgtatctgaacttcag
gacaaaattgaggacttctgcaaggaggaattagtcaaaataaccaaaacagtgaatgaa
gttgcagtttacagtctgcaggatccagagccaaggaacagagctgagtttttaaaatat
tcctgtcagctcacactgaatcccaacacagcatatagaaacctctgtttgtctgaaggg
aacagaaaggtgactggtaaaagggagacccagccatatcctgatcacccagagagattt
gacaactggtcccatgtgctttgcagagaggatttgtctgggactccatgttactgggag
attgagtggagtgggactggggtttatataggagtcacatgtaaaggaatcagcaggaaa
ggattgagtgattcctgtgcccttggatacaatgacaagttgtggagattgttctgctct
gattccagttatactgcccggcacaataacaaccaatctgcaataactgccccccactcc
cccagaataggagtgtatcaggactttaatgctagcacactgtcattttatagagtctct
aacacaatgaccctcctgcacagaatccaaaccgtattcactgagccagtctatcctggg
tttgggattcattttgattccactgtgacaatctgccagctgaactag
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