Acipenser ruthenus (sterlet): 117434214
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Entry
117434214 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117434214
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117434214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
HDA2-3
DEAD
MUN
GH97_C
DUF3437
Motif
Other DBs
NCBI-GeneID:
117434214
NCBI-ProteinID:
XP_034761869
LinkDB
All DBs
Position
24:27610648..27650028
Genome browser
AA seq
2700 aa
AA seq
DB search
MKVQKKGKQMASSKVLKHTPAAAAVSTADDPSAQSPFPCSQTSLPEQPRASGLSNHCMVH
ARPGLGQDPAPPVNGIEDDGGGSRVKKKRKKKEMEEPGGGAAAKGTSQKEPKPKKKREPK
EEGKEPKKDKQPKEAKKGKELKQQKEPKKTRKPRETKAPKEKRTATSPKTRGRKPSKDQG
QTPMEKKKKGKRKSETPVDSLDSDENISLAAHVPSAEETTDSTDGQKRRSGRQVKRRKYN
EDLDFKVVDDDGETIAVLGTGRIPALSSSTLAWQSEEPPEDEANIIERILSSRWVNYETS
PGEPILEAEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDE
DLFNPDYIEVDRVLEVAYTKDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPGKIKEFE
DIQKIPAIKHMERPAADTWQKLERSRDYRNANELREYQLEGMNWLLFNWYNRKNCILADE
MGLGKTIQSITFLYEIFLLGIRGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQ
MIQQYEMLYKDEQANPVPGLFKFHGVITTFEMILADCPELKKIHWRCVVIDEAHRLKNRN
CKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPVQFPSESTFLDEFGDLKTEEQ
VKKLQALLKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLAKGAN
QHNMPNLINTMMELRKCCNHPYLITGAEEKILEDFRKNHSPEAWDFQLQAMIQAAGKLVL
INKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCK
VDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL
ITRNSYEREMFDKASLKLGLDKAVLQDINKKGSTNGVQQLSKMEVEDLLRKGAYGALMDE
EDEGSKFCEEDIDQILQRRTRTITIQTEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWA
KIAELELDSKDEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELESDSEDRPSRTRRLNE
RHRRYMRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLVEKDMELICRALLVYCVKHYKG
DEKIKSFIWDLITPTKDGHSQDLQNHSGLSAPVPRGRKGKKLKNPMSLPEIKSADWLVSC
NPEILLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAAVKALEGIHSRDLDVLLPDI
DYLEIPAEWWDGDADKSLLLGVHKHGYERYHAMRTDPKLCFLERVGMPDELEQGVADVLS
ERSDTSKEDDLVNKEAVECDKDLAEEEAVVCNEAKDKVENVTAAPDCSDQDRPVWPVASS
LTARLRRLITVYQRFNRKELIRSEFLVPDGHGTWHLSEEMRRRVVEPDPLFLEMQNRWTR
REQADFYRTVSSFGVVFDPEKKCFDWTQFRMFARLERKTDQSLERYFHSFVAMCRCSCRL
PPRKDEGPLDQPVFVEPITEERAARTLYRMELLRKVREQVLXAPELASRLQLCQPSLYLP
VWWECGKHDRDLLIGAAKHGLSRTDYYILNDPQLYFLEAHRNYVQKENKRHPGHAPARCC
LYEASVSQCASPVPYPGTHHAMEAAGSIMDPCAGEVGPGSKDVFMEDSMNLASLHHDETL
GAGNTLHGKALKDSSNAFPFNTDTGGQSMLNTYSVQADAQAVAGKLHADPLGNEQSHCEA
DLMVPSGGLDEIQTQWDSTEHSNAADIFNESGAILGAQTLVSEFLDSAQPAEERAESSLP
DCMTMPSLNSQGSSMELLPSSFMLFKEITGPGNVQDEPEIPGICVDHCAPDYVPPVTVTD
LKMNHDCEDSVQENIGEPEEKLSDSDITQSAPSLCDGSESVNLEFEKDDLSHDDQSNVEE
PEEGQREAGQGCVCDVGDENTLSSQTYEGADQASPAFSVLEAPPASSGTESVGELRAEEY
SEDQHFTDVKPIKSEAGAGLVAPRQEERGMFVGALNEEKPQPTAVPVESCEEDAKYSAHA
ARFEIQEGLLQDTREPTIAQLLQEKALYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQ
QFDSPSSVSAQSCANSIAHRNNFLSARVPATQSLSFSIGAGVPQLAKDGLMSMPFMRDPG
RSRRGFEFESEAGSKQGRMEKIPVVLNGWQEAAMDLSKAGDLSVGGSPKLASVGPLQSSL
GLDMAGILQAGLIHPVTGQIVNGNLRRDDAVMRRRRGRRKNVEGVDLRFTRNRSLQNQEQ
NGQEGPGLPCSGSVRSDRRNPATQTQQAQSVVMEREVANKSLLEWLRQNPNYTMEMPAFS
HNVGILHGFAERPKQRRHRCKDPSKLDVNSLTGEERVPVVHKGTGRRLGGAMAPAIKELS
RWLDANAEYAVAPDWAEIVKHSGFLPEDKFSRILTEPVFRDPGPRRRGRRPRSEVVRAAG
SIPDSPSTMGPLFMNGLISGMDLVSLQNLRNMQGIPLTGLMGFPHGFATALPAGEEGKGG
VNMLPMMLHGMAAVQPHMFSVSGLLNPAATAATSSTTVTSSSTSPSSCGAEKDPADAPKG
EELEERQSDTSTSSHPEPTVTASGPLAFNPFLIPGVSHGLLYPHMFLPHSVSMALPSVQQ
ASPSEESPKSKKRKVKEDETTSQTETPPETQNPTSTEQEPPPPPAGDCAEQTAEEGEGLL
NT seq
8103 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcagaagaaaggaaagcagatggcctcctccaaggtattaaagcacactcca
gcagcagcagccgtctcaactgctgatgacccaagcgcacaatcccccttcccctgcagc
cagaccagcctgccagagcagcccagggcctcaggactgtccaatcactgcatggtgcat
gccaggccgggcctgggtcaggaccccgctccccccgtgaacgggatcgaggacgacggg
ggaggcagcagggtgaagaagaaacgaaagaaaaaagagatggaggagccgggcgggggg
gcagcagcgaaggggacgagccagaaagaacccaaaccaaagaaaaagagggagccgaaa
gaagaagggaaggaaccgaaaaaagacaagcagcccaaggaggcgaaaaagggcaaggaa
ctgaagcagcagaaagaacccaagaagacgaggaaaccgcgggagacgaaggcccccaag
gagaagagaacggccacaagcccaaagaccaggggccggaaacccagtaaagatcaaggc
caaactcccatggagaagaagaagaaggggaagaggaaaagcgagacccctgtggactcc
ttggattctgacgagaacatttctctggctgcccacgtcccaagtgcagaggagaccact
gattccacagacgggcagaagcgccgttcgggccggcaggtgaagaggaggaagtataac
gaggatctggatttcaaagtggtcgacgacgatggagaaacgatcgctgtgctgggaaca
gggagaataccggctctgtcttcatccacactggcttggcaatccgaggagcccccggaa
gatgaagccaacatcattgagaggatcctgtcatctcgctgggtgaattatgagacttct
cctggtgagccgatcctggaggctgaagagttctacgtcaagtacaggaatttctcatac
ctgcactgtaagtgggccacgcttgaagagctggagaaggatcccaggatcagtcagaaa
atcaagcgcttcaggaacaaacaggcacaaatgaaacacattttcacagagccggacgag
gacctgttcaatccagactacattgaagtggacagagtgctggaagtcgcctacactaag
gatacagagactggggaggaagttactcattatttggtgaagtggtgctccctgtcctat
gaagagagtacctgggagttacaggaggatgtggatcctgggaaaatcaaagagtttgag
gacatccagaagatccctgccataaagcacatggagcgcccggccgcggacacctggcag
aagctggagcgctcgcgggattacaggaacgccaatgagctgcgcgagtaccagctggag
gggatgaactggctgctgttcaactggtacaacagaaagaactgcatcctggcggatgag
atgggcttggggaagaccatccagtccatcacgttcctctacgaaatattcctgctgggg
atccgggggccgttcctcatcatcgcgcccctgtccaccatcaccaactgggagcgcgag
ttccgcacctggactgagatgaatgccatcgtctaccacggcagccagatcagcaggcag
atgatccagcagtatgagatgctgtataaggatgagcaggctaaccccgtcccgggtttg
ttcaagttccacggggtcatcaccaccttcgagatgatcctggctgactgcccggagctc
aagaagatccactggcgctgcgtggtgatcgacgaggctcaccgcctcaagaacaggaac
tgcaagctgctggaagggctcaaactcatgaacctggaacataaagtgctgctgactggc
accccgctacagaactctgtggaggagctcttcagtctcttgaacttcctggagcccgtg
cagtttccctcggaaagcaccttcctggacgagtttggagatctcaaaacagaggaacag
gtgaagaagctgcaggccctcctgaagcccatgatgctgcgcaggctgaaggatgatgtg
gagaagaacctggccccgaaggaggagaccatcatcgaggtggagctcaccaacatccag
aagaaatactaccgagccatcctggagaagaacttcactttcctggccaagggggccaac
cagcacaacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgtaaccac
ccctacctgataaccggtgcggaggagaagatcctggaggatttccggaagaaccacagc
ccggaagcctgggacttccagctgcaggccatgatccaggcagcggggaagctggtgctc
atcaacaagctgctgcccaagctgattgccggcggacacaaggtgctcatcttctctcag
atggtgcgctgcctggacatcctggaggactacctcatccagagacggtacacctatgag
cgcatcgacgggagagttcgagggaacctgcgccaggccgctatcgatcggttctgcaaa
gtggattcggaccggttcgtatttctgctgtgcacgagagcagggggcctcggcatcaac
ctgactgctgctgacacctgcatcatcttcgactcggattggaacccacagaacgacctg
caggcccaggcccgctgccacagaataggccagagcaaagcggtcaaggtgtatcgcctg
atcaccaggaactcctacgagagggagatgtttgacaaagccagcctgaagctcgggctg
gacaaagcagtgctgcaggacatcaacaaaaagggaagcaccaacggggtgcagcagctg
tccaagatggaggtggaggacctcctgcgcaagggggcgtacggagccctaatggacgag
gaggacgagggctccaagttctgtgaggaagacatcgaccagatcctgcagcgccgaaca
cggaccatcaccatccagaccgagggcaagggatccaccttcgccaaggcaagctttgta
tcttcaggaaacagaactgacatttctttagacgaccccaacttttggcagaagtgggcg
aaaatagcagagctggaactggattccaaagatgaaaaggagagcttggtgatcgacacc
ccgcgtgtgcggaagcagacccggcactacaactccttcgaggacgacgagctgatggag
ttctccgagctggagagcgactccgaggaccggccttcacgaacacgccgcctgaacgag
aggcaccgccgttacatgcgggccgagtgcttccgggtcgagaagaatctgctcatattc
ggctggggccgctggaaggacatcctgacccacggcaggttcaagtggcacttggtggag
aaggacatggagctgatctgccgggctctactggtctactgtgtcaaacactacaaagga
gacgagaagatcaagagcttcatctgggacctcatcacccccaccaaggacgggcacagc
caggacctgcagaaccactctggcttgtctgcgccggttcccagggggaggaaggggaag
aagctgaagaacccgatgtccctgccggagataaagagcgcagactggctggtcagctgc
aaccccgagatcctccttcacgacgacagctacaagaagcacctcaaacagcactgcaac
aaggttctgcttcgagtgaggatgctgtactacctgaaggcggaggtgctgggagaggcg
gctgtcaaagctttagagggcattcacagccgcgacctggacgtgctgctccctgatatt
gactacctggagattccagcggagtggtgggatggggacgctgataaatctctgctctta
ggcgtccacaagcatgggtatgaacggtaccatgccatgcggacagaccccaagctgtgc
ttcctggagagggtggggatgcctgatgaattggagcagggggtggcagacgtgctcagt
gagaggagcgacacaagtaaagaagatgatttggtcaacaaggaggctgtggaatgcgat
aaagacttggctgaagaggaagctgtcgtctgtaacgaagcaaaagacaaagtagaaaac
gtcactgcggccccggactgctccgatcaagacagacccgtgtggccggttgcttcctcc
ttgaccgcgagactgcgccggctgatcactgtgtaccagcgcttcaaccggaaggagttg
attcggagcgagttcctggtgccggacggccacggcacctggcatctgtccgaggaaatg
aggaggagggtcgtggagccagaccccctgttcctggagatgcagaacaggtggaccaga
agggaacaggcagatttctaccggacagtctcttcctttggagtggtgttcgaccctgaa
aagaagtgcttcgactggacgcagttcaggatgttcgctcggttagagagaaagacagac
cagagcctggagaggtatttccacagcttcgtggccatgtgtcgctgctcctgccgactg
cctcccaggaaagacgaagggccgctggaccagcccgtgttcgtggagccgatcacggag
gagcgagcggcgcggacgctgtaccggatggagctgctgcggaaggtgcgcgagcaagtc
ctcncggcacccgagctggcctcgcggctccagctgtgccagcccagcctctacctcccc
gtgtggtgggagtgcggcaagcacgaccgggacctcctgatcggggccgccaagcacggg
ctgagccgcactgactactacatcctcaacgacccccagctctacttcctggaggcgcac
aggaactacgtgcagaaggagaacaagcgccaccccggccacgccccggcgcgctgctgc
ctctatgaagccagtgtcagccagtgcgcctccccggtcccttacccagggacccaccat
gccatggaggctgcagggagcatcatggacccctgtgctggcgaggtcgggcccggcagt
aaggatgtgttcatggaggactcgatgaatctggcttctcttcaccatgatgagaccttg
ggggcaggtaacacgctacacgggaaagctttgaaagactcgtccaacgctttcccattt
aacacggacaccggagggcagagcatgctgaatacgtacagcgtgcaagccgacgcgcag
gcggtcgcagggaagctgcacgcagatcctttagggaacgagcagagccactgcgaggcc
gatctgatggtgccgtcgggtggcctggatgagatacagacccagtgggacagcacggag
cattcgaacgcagctgatatatttaacgaatcgggagcgatcctcggagcgcagaccctg
gtgtcggagttcctggattcagcccagccagccgaggagagagcagaaagctccctgcca
gactgcatgaccatgccgagcttgaactcccaaggcagtagcatggagcttttaccaagc
agcttcatgctgtttaaggaaataactggtccgggtaacgttcaagacgagcctgaaatt
ccaggcatttgcgttgatcactgtgcacctgactacgtaccccctgtcactgtgacggac
ctcaaaatgaaccacgactgcgaggacagtgtgcaggagaacatcggggaacccgaggaa
aagctgagcgattctgacatcacccagagcgcgccaagcctgtgcgacggcagcgagagc
gtaaacctggagtttgagaaggacgatctctcgcatgatgaccagagtaatgtagaagag
cccgaggagggacagagggaggctggacaaggctgtgtctgcgacgttggagatgaaaat
accctcagcagtcaaacctacgaaggggcagaccaggcgtctcccgcgttctcagttctg
gaggctccgcctgcatcgtcaggaacggagtcagtcggggagttgagagcggaggagtac
agcgaagaccagcacttcacagacgttaagcccataaaatcagaggctggagctggtctg
gtagcacccagacaagaagagagggggatgtttgtaggagccctgaatgaggaaaaaccc
caacccacagctgttcctgtggagagttgtgaagaagatgccaagtactctgcccacgct
gctcgctttgagatccaggaggggcttctgcaggacacccgggagcccaccattgcgcag
ctgctgcaggagaaagctctttactccttctctgagtggccaaaggatcgggtgatcatc
aaccgaatcgataacatctgccatgccatcctgaaggggaaatggccatcttctagtcag
cagtttgactctccgagctctgtgtctgcccagagctgtgcgaacagcatcgctcacaga
aacaatttcctctccgcgcgggtcccagcgacccagagcctgagcttcagcatcggggct
ggcgtcccccaactcgctaaggatgggttgatgagcatgccgttcatgcgggaccccgga
agaagccggcgggggtttgagtttgaatcggaggcgggctctaagcagggcaggatggag
aagatcccggtggttctgaacggctggcaggaggccgccatggacctctcgaaggcgggg
gatctgtctgtgggcggctcccccaagctggcctccgttggccccctgcagagctcactg
gggctggacatggccgggatcctgcaggccggcctcattcaccccgtcacggggcagatc
gtcaacggtaacctgcgcagggacgacgccgtcatgaggaggaggcggggtcgcaggaag
aacgtggaaggggtggacctgcgattcaccagaaacagaagccttcagaatcaggagcag
aatggtcaggagggtccaggcctgccttgctctgggtccgtgcggtctgacaggcgaaac
ccagccacacaaactcaacaagcacagagtgtggtgatggaaagggaggtcgccaacaag
agcctgctggagtggctcaggcaaaatcccaactacacaatggagatgcccgccttctcc
cataacgttgggatcctgcacggctttgcggagcggcccaagcagaggaggcatcgctgc
aaagaccccagcaagctggatgtgaactcgctgaccggggaggagagggtccctgtggtg
cacaagggcaccgggaggaggctgggaggcgcgatggccccagccattaaggagctgtcc
cggtggctggatgcaaatgcagagtatgctgtggcaccagattgggctgagatcgtcaag
cactcagggtttctcccggaagacaagttcagccgcatcctcacagagccagtcttcaga
gacccgggccccaggagaagaggcaggcgtccccggagcgaggtggtcagggcagccgga
agcatcccggactccccttccacgatggggcccttgttcatgaacggactgatcagcggc
atggacttggtaagcctccagaacctgaggaacatgcaggggatccccttgactggactc
atgggcttcccgcatgggttcgccacagcactccctgctggggaggagggcaagggcggg
gtgaacatgttgcccatgatgctgcacggcatggccgctgtccagccgcacatgttcagc
gtcagcggactcctgaacccggcagccactgcagcgaccagcagcaccaccgtcaccagc
agcagcacatcgccctcttcctgcggggcagagaaggaccctgcggacgcacccaaagga
gaggagttggaggagaggcagagtgacaccagcaccagcagccaccccgagcccacagta
actgcgagcggaccgttggctttcaatcctttcctgatcccgggcgtgtcccacgggctg
ctgtacccgcacatgttcctcccgcacagtgtcagcatggcgctgcccagcgtgcagcag
gccagcccctcggaggagagccccaagagcaagaagaggaaagtgaaggaggacgagacc
acctctcagactgaaacccctccagagacccagaacccaaccagcacagaacaggagccg
cccccgccgcccgcaggggactgtgcagagcaaacggctgaggagggggaggggttgctg
tag
DBGET
integrated database retrieval system
