Acipenser ruthenus (sterlet): 117434824
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Entry
117434824 CDS
T07327
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arut01002
]
117434824
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117434824
Enzymes [BR:
arut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117434824
Peptidases and inhibitors [BR:
arut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117434824
Ubiquitin system [BR:
arut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117434824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
MCM4_WHD
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
117434824
NCBI-ProteinID:
XP_033913380
LinkDB
All DBs
Position
26:complement(10779367..10800018)
Genome browser
AA seq
1369 aa
AA seq
DB search
MEMVPSDENELVPKEGMFWSCRQSIFDEMKKKFSQIENAADEPRVLCIVQDTTNAKTVNE
RLTLNLPASTSLRKLFEDVASKAGYVNNTFDLVWGSPTDLAPLDHSSDKPLSESGFEAGK
KNFLHLTDKDGEQPQIASDESGTADSSGLDDSSRDRFVGPLPRDGTVGCSSDYSSQSYSY
SSILSKSETGYVGLVNQAMTCYLNSLLQTLYMTPEFRNALYNWEFEESEEDQVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWRLTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSNQAFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHVPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDGVDEGICLESSSSAGLKS
KSSLTYELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSG
SRGYYSSAFASSTNAYMLIYRLKDPARNAKYLDVQEFPEHIKYLVQKEEEMEEQEKRQRE
IERNTCKIKLFCMHPVKMIMMENKLEVHRDKTLREAVEMAYKLLDLDGFVALDCCRLVKY
DEFHEYLERSYEGEEETPMGLLLGGVKSSYMFDLLLETKRPEQVFQLYKPGEVMVKVHVV
DLKTETIALPVTVRAYLNQTVTEFTQLLSQATGLSADTMRIVLERCYNDLRLLYVPNKTL
KAEGFFRSNKVFIESSDSADHQVTFTDSHLWKLLDRHGNTIRLYVSLPVQSQLNRTISQK
AGGDSGSLEDTFERAKGNRKTVEAILEESTEKLKNLSLQQQQQQGGNSESVKSTEACDFE
NIESPSQETDSTSLDNRELENRIQTSDPESNLQSEERSDSDLNNDRSTSSVDSDILSSGH
SSDTLCNADNAPIPLANGLDSHSITCSRRSKANEGKKETWDTAEEDSGTDSEYDENGKSK
GETQYVYFRAEPYTSDDGSGEGQKCLLVHLDKRITLAAFKQNVESFVGVPSSQFKVFRVY
ANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCRFLIDSVF
AKGMTVRQSKEELLLPLKEQCKLNLSIDRFRLRKKTWKNPGTVFLDYHVYEEDINISSNW
EVFLEVLDEPEKMKSMSQLAVLTRRWSPSQMKLEPFQEVVLESSSVDELKQKLSEISGIP
VENTEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDKTEELMD
LSDEGRNELMKKESSRLLKTGHRVNYSPRKEKALKIYLDGAPSKDSSQD
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggttcctagcgatgaaaatgaactcgtaccgaaagagggtatgttttggagt
tgcagacaaagtatttttgatgaaatgaagaagaaattctcacagattgaaaatgctgca
gatgaacctcgcgtgctgtgtatcgttcaggacaccacgaatgctaagaccgttaatgag
agacttaccttaaacctccctgcttcaacctccctcagaaagctctttgaggatgtcgcc
tccaaggctggctatgtaaataacacttttgatttggtgtggggcagtcctacagacctg
gctcccctggatcatagcagtgacaaacctctgtcagagtctggctttgaagcagggaag
aaaaactttctacatctgaccgataaagatggcgaacagcctcaaatagcatcagatgaa
tcgggtacagcggacagcagtggccttgatgacagctctcgggacagatttgttggtcct
cttcctagagacggcacagtcggctgcagcagcgactacagcagccagagctactcgtac
tcctctatcctcagcaaatcagaaactggatatgttggtttggtgaaccaagccatgacc
tgctacctaaacagcttgctgcagaccctctatatgactcctgagttcagaaatgctctg
tacaactgggagtttgaggagtctgaagaagaccaagttaccagcatcccataccaactc
cagcggctctttgttttgttgcagaccagtaagaaaagagccattgaaacaacagatgtg
acccgcagctttgggtgggacagcagtgaagcttggcaacagcatgatgtccaggagtta
tgcagagtcatgtttgatgcactggagcaaaagtggaggctgactgagcaggctgacctt
atcaatcagctgtatcagggcaagttgaaggattatgtacggtgtctggagtgtggatac
gagagctggagaatcgacacttatctcgatatcccgctggtcatccgaccctatggttcc
aaccaggcatttggcagtgtggaagaagcacttcaagcattcatccagccagagactctg
gatggccccaatcaatacttctgtgagcgctgtaaaaagaaatgtgatgcacgaaagggc
ctgaggttcctgcacgttccctacctgttgacgctccagttaaagcggtttgattttgac
tacaccaccatgcatcggattaagctgaacgatcgtatgactttccctgaagagctggat
atgagtccttttattgatgtagaagatgagaaatcgcctcaaaccgagagttgcacagac
agtggagctgaaaacgaagggagctgtcacagcgatcagatgagcaatgatttctccact
gatgatggcgttgatgagggaatttgtctggagagcagcagcagtgcaggtttaaaatct
aagagttctttaacttacgagctcttctcagttatggtccactctggaagtgctgctggg
ggacactactatgcttgcatcaaatcgttcagcgatggccagtggtacagttttaatgat
cagcatgttagtaagattacccaagatgacattcggaaaacttacggtggatcctcagga
agcagaggctattactccagcgcctttgccagctccacaaatgcatacatgctgatttat
aggcttaaggatcctgcaaggaatgcaaagtatttggatgttcaagaatttccagagcat
ataaagtacctagttcaaaaagaggaggagatggaagagcaggaaaagaggcaacgcgaa
attgaacgcaacacctgcaagattaagctgttctgcatgcaccctgtgaagatgatcatg
atggaaaacaaacttgaggtccatagagataaaacactgagggaagctgtggaaatggca
tataagttgctggatctggatgggtttgttgcactggactgctgtcgacttgttaaatat
gatgagtttcatgagtacctcgaaaggtcctatgaaggagaggaggagaccccaatggga
ttgttgctaggtggagtgaagtcatcctatatgtttgacctgctgttagaaacaaaaaga
ccagaacaggtcttccaactgtacaaaccaggagaagtaatggtgaaagtgcatgttgtt
gacctcaaaacggagaccattgcccttcctgtcactgttcgagcttacttgaaccagacg
gtcacagagttcacgcagctcctttcacaggcaacaggactttctgctgacacgatgcgc
atagtgctggagcgttgctataatgatctaagactgctctatgtgcccaataagacactg
aaggcagagggattttttagaagcaacaaggtgttcattgaaagctccgattcagcagat
caccaggtcacttttacggattctcatttatggaagctccttgatcgccatggaaacact
attaggttgtatgtttctttacctgtacaatcccagcttaacaggaccatttcccaaaaa
gctggtggcgattcaggcagtttggaggacacctttgaaagggcgaagggtaacagaaag
actgtggaagcaattttggaagaaagcaccgaaaaactcaagaacttgtcactccagcag
cagcagcagcagggaggaaacagcgaaagcgtcaagagcacagaggcatgtgactttgag
aatatcgagtccccctcccaggagactgacagcacctcattagacaacagagagctggag
aaccggattcagacctccgatcctgaaagcaacttgcagtcagaggagcgctcggactct
gacttaaacaatgaccgcagcactagctcagtggatagcgatatcctcagctcaggtcac
agtagtgacacattgtgcaatgctgacaatgcccccatccctttagccaacgggctggat
tctcacagcatcacgtgcagtcggaggtcaaaagcaaacgagggcaaaaaggaaacgtgg
gatactgcagaggaggattctgggacagacagtgaatatgacgagaatgggaagagcaaa
ggagagacccagtacgtttatttcagggcagagccatacacttcagatgatggttcagga
gaaggacaaaaatgtttgttggtccatcttgataaacggattacgttggctgcctttaaa
caaaatgtggagtcctttgttggagttccatcttcccagtttaaggtctttcgggtctac
gccaacaaccaagagtttgaaagtgttaggctaaatgagacgctgtcctccttttcagat
gataacaagataacaatacgattaggaagagcactaaaaaaaggggagtatcgggtcaaa
gtttaccagcttctagtaaatgatccagagccctgcaggtttttgatagattcggtgttt
gcaaaaggaatgactgtgcggcagtctaaagaagagcttttgcttcctctcaaggagcag
tgtaagctgaacctcagtattgacagatttcgactgcgaaagaagacttggaaaaatcct
ggaacagtatttctggactatcatgtctatgaagaagatatcaacatctccagcaattgg
gaggtcttccttgaagtgcttgatgaacctgagaaaatgaagtccatgtcccagctggct
gtgctaacaaggcgatggagcccgtcgcaaatgaagctggaacccttccaggaagtggtc
ctggaaagcagcagcgtcgatgaactgaagcagaagctgagtgagattagtgggattcct
gttgaaaatacagaatttgcaaagggtagaggaacattcccctgtgatatctcaatcttg
gaaattcatcaggatttagattggaatccaaaagtatcgacactcaatgtttggcctctc
tatatctgtgatgatggagctgtcgtcttttacagagacaagacagaggagctgatggat
ctgtcagatgaaggcaggaatgaacttatgaaaaaagaaagcagtcgtctccttaagaca
ggacacagagtgaactactctccccgtaaagagaaagcactaaagatctatttggatggt
gcaccaagtaaagactcaagccaggactga
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integrated database retrieval system
