Acipenser ruthenus (sterlet): 117962993
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Entry
117962993 CDS
T07327
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K09095
hypoxia-inducible factor 2 alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117962993
04131 Membrane trafficking [BR:
arut04131
]
117962993
Transcription factors [BR:
arut03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117962993
Membrane trafficking [BR:
arut04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117962993
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
GxGYxYP_C
Motif
Other DBs
NCBI-GeneID:
117962993
NCBI-ProteinID:
XP_034771061
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All DBs
Position
54:2037899..2062114
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AA seq
797 aa
AA seq
DB search
MSERTGKKRVCSERRREKSRAAAQSRRGRESEMFTELALQLPLPHGTALHLDKASIVRLT
LSYLRLRALLDTAGAGDRKADSEDRDTVLGASIEGFLLLISQSGHIVYTSEAVASHVGIH
QMELIGQSVFEFIHPCDQDEMNEALNSKQEPSVAGRRRNCDFFLRMKCTLTNQGRTVNLK
SASWKVLHCTGHMKLPCPSQTPYGTPKGCLVLLCEPVPVPSSSDCSLNPNTFLTRHSMDM
SFTYCHPRVNDLLGYEEGELLGRSVYEFCHAVDTDHVRRTHHSLLSKGQSSTGLYRLLAK
RGGYVWVQTDAAVIYDSRSGQPQSVICVNYILSGREESEVIFSLEQTESLLKPRPSVATA
TPDDAHLLFTELWEEPDELARLAPEPGDDIIALDFESSDRELERFDVLPVYWAPLGYGAE
RCGTQTSSPTPFRGYPNQGSCETPTESCKVTSFSDSEPPEENPHSQPVLLIEPMFEPREQ
NQDKSQEDLSKLDLETLAPYIPMDDEDFQLTPISEGAEEWGSGQGEVGEASCFTLPSLEL
REERYTAPTFQGTNLPKHPSFGGPLCPQVPPRSQQRGVLWPSDPPFSRAINGTPQRPNWL
QQTPCSARTSTNITLQETRNTLEEYFHGNSCRVNGTLSLSNSLKRRPQSSVFQSSQSNTE
CTCEHLGEPIHWKRIKLPLRTNQNTACIPQTEGDACWWSSGQTPCHWQTDQRGTVPWGPW
AGAATAGTADHCSATQPPDPTPWKPELSSCLLSSPADRSVLPVLTRWECEVNAPLTAASR
LLHGSEILRVLDQLCPD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagaacaggcaagaaaagggtgtgctcggagaggcggagagagaagtcccgg
gccgcggcgcagagccggagaggcagggagagcgagatgttcacagagctggcactgcag
ctgcccctgccccacggcactgccctccacctggacaaggcgtccatcgtgagactgacc
ctgagctacctgcgactgcgagccctgctggacacagcaggtgcaggtgaccgcaaggcg
gacagtgaggacagagacacagtcctgggggcgtcgatagaggggttcctgctgctcatc
tcccagagcggccacatcgtgtacacctccgaggccgtggccagccacgtgggcatccac
cagatggagcttatcgggcagagtgtttttgagttcatccacccctgtgaccaggacgaa
atgaacgaggctctgaactctaagcaagagccctcagtggcggggagaaggcggaactgt
gacttcttcctgagaatgaagtgcactctgaccaatcagggccgcactgtcaacctcaaa
tcagcttcctggaaagtcctgcactgcacaggccacatgaagctgccctgcccctcacag
accccctacgggacccccaagggctgcctggtcctgctttgtgagcccgtgccggtcccc
agcagcagtgactgcagcctgaaccccaacaccttcctgactcgacacagcatggacatg
agcttcacctactgccaccccagggtgaatgatttgctgggttatgaggaaggtgagctg
ctgggacgctcagtgtatgagttctgccacgctgtggacacggaccacgtcaggaggact
caccacagcctgctcagtaaaggccagtcctccaccggtctctaccgtctcctggccaaa
aggggcggctacgtgtgggtgcagaccgacgcagcagtcatctacgacagccggagcggt
cagccacagagcgtgatctgtgtcaactacatcctgagtggtcgggaggaatcggaggtg
attttctcattggagcagacagagtctcttctcaagccccgcccctccgtcgccacggca
acacccgacgacgcccacctgctcttcaccgagctgtgggaggagcccgatgagctggca
cgactggcacccgagcctggcgatgacatcatagcgctggacttcgagagcagcgacagg
gagttggagcggtttgatgtcctcccggtctactgggctcccctggggtacggggcagag
cgttgtgggacacagacctcctccccaacccccttcagggggtaccccaaccaggggtcc
tgcgagacgccaacagaaagctgcaaggtcacttccttttctgattccgaacccccagag
gagaacccacacagccagccggtcctgctgatagaacccatgtttgagccgagggagcag
aaccaggataagagccaggaggacttgagtaagctggacttggagaccctggctccatat
atccctatggacgatgaagacttccagctgacccccatcagtgagggggcagaggagtgg
ggttcggggcagggggaggtgggggaggccagctgcttcactctcccctccctggagctg
agagaagagcggtacacagcccccacctttcaggggaccaacctacccaaacaccccagt
ttcgggggccccctctgcccccaggttccccccagaagtcagcagcgaggggtgctgtgg
ccctctgacccccctttcagcagggctatcaatgggaccccccagcgcccaaactggctt
cagcagaccccctgttctgcaaggacctctacaaatatcacactacaagaaaccaggaac
acattggaggagtacttccatggaaacagttgtcgggtgaacggaacactcagccttagc
aacagcctgaagaggagaccgcagagttctgtgttccagtccagccagtcgaacacagag
tgcacttgtgaacatctgggggaaccaatccactggaagagaatcaaactccctctgagg
accaatcaaaacaccgcctgcattccacagacagagggagacgcctgctggtggagctca
ggtcagaccccttgtcattggcagacagatcagagaggcaccgtgccctgggggccgtgg
gcaggagcagctacagcgggcacggctgaccactgcagtgccacccagccaccagacccc
actccctggaaaccagagctgtcctcctgtctgctgtccagtcctgctgaccgctctgtg
ctgccggtgctgacccgctgggagtgcgaggtcaacgcccctctgaccgctgcgtcccgc
ctgcttcacgggtccgagatcctcagagtgctggaccagctgtgtccagactga
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