Acipenser ruthenus (sterlet): 117963254
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Entry
117963254 CDS
T07327
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arut03016
]
117963254
Enzymes [BR:
arut01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
117963254
Transfer RNA biogenesis [BR:
arut03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117963254
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
117963254
NCBI-ProteinID:
XP_034758439
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Position
20:25386195..25442178
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AA seq
690 aa
AA seq
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MLLRMILTKKKEISKIGSATSSVSHVKENGHSLQKEQEIHVSAVKIFFGSQTGTAKGFAN
DLAKDVETLGLPAEVNDLNGYDPDDSLPDETTSRAVCVFILATYTDGQPTENAEWFCKWL
QEASNDFRYGKSYLKGLRYAVFGLGNSVYIGHYNTVSKNVDKWLWMLSGSRIMTRGQGDC
NVVKSKSGSVEGDFKAWKSTFLSRLQALVRGEKQACSGDCKKGKCKNKKHQHSEENKQNA
GTQEEHSSEEIFETSSEEDSSHEEEASRGSVIDVEDLGNVMNHMKKAKKKNETEVKLSKQ
GPVKSEDAEAREMITPALRDALTKQGYRLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEKILQEAIENHQNMIKQFRG
VPGLKADRYEEGMAVKHCALSLVGEPIMYPEINRFLRLLHHHKISSFLVTNAQFPEEIRT
LEPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLKALGDKQQRTVYRLTLVKAWNV
DELRAYSELVTLGRPDFIEVKGVTYCGESSASSLTMANVPWHEEVIHFVQQLADQLPDYE
IASEHEHSNCLLIAHKKFKVDGEWRTWIDYERFQELMKEYEESEGARVFSAADYMARTPQ
WALFGAKGRGFDPADTRFHRKNKSKDISGC
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcggatgattctgactaagaagaaagagatcagtaaaattggctctgcaact
tcatccgtcagtcatgtgaaggaaaatggccattcgctccagaaagagcaggagattcat
gtctcagcggtgaagattttctttgggtctcagactggaacagcaaagggatttgcaaac
gatcttgccaaggatgtggagactttgggtctgcctgctgaagtcaatgacctgaatggt
tatgatccggatgacagtctgccagatgagactacaagcagagctgtttgtgtgttcatc
ctggccacttatacagacgggcagcccacagagaatgcagagtggttctgtaagtggctg
caggaagcatcaaatgatttcagatatggcaaatcatacctaaaaggtctgagatacgca
gtgtttggattgggaaactctgtttacatcggccactacaacactgtgagtaagaacgtg
gacaagtggctgtggatgctgagtggcagccggatcatgacccgtggacagggagactgc
aacgtggtgaagagcaagagcggcagcgtggagggagacttcaaggcctggaaatccacg
ttcctgagccgcctgcaggctctcgtgaggggagagaagcaagcttgcagtggggactgt
aagaagggaaagtgcaagaataagaagcaccagcacagtgaggagaacaagcagaacgcc
gggacacaggaggagcacagttcagaggagatttttgagaccagtagcgaggaagactcc
agtcacgaggaagaagcctctcggggatctgtgattgatgttgaagatctgggcaatgtc
atgaaccatatgaagaaagccaagaaaaaaaatgaaaccgaggtcaagctgtccaaacag
ggtcctgtgaaaagtgaggacgcagaggcacgggaaatgatcacaccggctctccgggac
gccctcacaaagcaaggttataggctgataggaagtcattctggtgtgaagctctgtcgg
tggaccaagtctatgctgagaggtaggggcggctgctacaagcacacgttttatgggatc
gagtctcaccgctgcatggaaacaactcctagtctcgcttgtgccaacaaatgtgtattc
tgttggagacatcacactaatccagtgggtacagagtggcgctggaagatggaccagcct
gagaagatcctgcaggaggccattgaaaaccaccagaacatgatcaagcagttcagaggg
gttcctggtttaaaggcagaccgatacgaggaaggaatggctgtgaaacactgtgcgctg
tccctggtaggagagcccatcatgtacccagagatcaatcgattcctcaggcttctacac
caccacaaaatctccagcttcctggtgaccaacgcgcagttccccgaggaaatcaggacc
cttgagcctgtaacacagctgtatgtcagcgtggatgccagcaccaaagacagcctgaag
aaaattgaccggccgctcttcaaggatttttggcagcgctttctggacagtttgaaagcc
ttgggggacaagcaacagcgcaccgtgtacagactgactctggttaaggcctggaatgtt
gatgagctgagagcctactcagaactagtaactcttggcagaccggacttcatagaggtt
aagggtgtaacttactgtggtgaaagttcagccagtagcttgaccatggctaatgtcccg
tggcacgaggaggtcatccactttgtacaacagcttgctgaccagctacccgactacgag
atcgcctccgagcacgagcactcaaactgcctcctgattgcgcacaagaagtttaaagtg
gatggcgagtggagaacatggatagactacgagaggttccaggagctgatgaaggagtat
gaggagagcgagggtgccagggtcttctctgcagcagactacatggccaggactccgcag
tgggcattgttcggtgccaaggggaggggcttcgatccagcagatacccgcttccatcgg
aaaaacaaatcaaaggacatctccggctgctga
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