Acipenser ruthenus (sterlet): 117965704
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Entry
117965704 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117965704
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117965704
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
DUF5764
DivIC
CdvA
LRIM1_dimer
Motif
Other DBs
NCBI-GeneID:
117965704
NCBI-ProteinID:
XP_034766600
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All DBs
Position
35:4428531..4478523
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AA seq
344 aa
AA seq
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MEEGAGSMEEGEESREDGAGSDEADWREQGACRREQGARRAEANILVAHDQFSCPVCLEI
LKDPVTTACGHSYCMGCIKNCWDHADHTGVYSCPQCRETFTPRPVLCRNTMLAEIVEKLK
KTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCRASYCETHVKPHYEGAAFKRHKL
INAIGDLEQKFCAEHQKVLEVFCRTDRTCICLLCSQIEHRSHDTVSAEAERSVKQKQLGE
TQTEIQQRIQERLKEIEELEQTVESLKRSACIEIKESEKIFTELIRSIEKIHTEVIELIG
ANEKAAVNQAEGRMKKLEQEIAELRRRNTELKQLSETEDHIHFL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggagcagggagcatggaggagggagaagagagcagggaggacggagcaggg
agtgatgaagcagactggcgagagcagggtgcatgcaggagggagcagggagcaagaaga
gcagaagcaaatattttggtagcgcatgaccagttcagctgtccagtgtgtctggagata
ttgaaggacccagtcactacagcatgtggacacagttactgtatggggtgtattaagaac
tgctgggatcacgctgatcatacaggtgtctacagctgcccccagtgcagagagaccttt
accccgaggcctgttctgtgcagaaacaccatgctggctgaaattgtggagaaattaaag
aagactggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgt
gatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgtcgggcctct
tactgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaagctg
atcaatgcaattggagatctggagcagaagttttgtgctgaacaccaaaaggttttggag
gtcttctgtagaactgatcggacgtgtatttgcttgttgtgttcacaaattgaacacagg
agccatgatacagtctcagctgaggcagaaaggagtgtgaaacagaagcagctgggagag
acacagacagaaatacaacagagaatccaggagagactgaaagaaattgaggagctggaa
cagactgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatc
tttactgagctgatccgatccattgagaagatccacactgaggttattgagctgattgga
gctaacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggag
attgctgagctaaggaggagaaacactgagctgaaacagctttcagagacagaggatcac
atccattttcta
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