Acipenser ruthenus (sterlet): 117965715
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Entry
117965715 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117965715
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117965715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_10
U-box
DUF5764
CdvA
MAP65_ASE1
Y1_Tnp
Baculo_PEP_C
Laminin_II
DivIC
Motif
Other DBs
NCBI-GeneID:
117965715
NCBI-ProteinID:
XP_034766614
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All DBs
Position
35:complement(7045978..7051626)
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AA seq
369 aa
AA seq
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MASKVWSEDQFSCSVCLELLKDPVAIPCGHSYCMGCPQCRETFTPRPVLRRNTMLAEVVE
KLKKTRLNPPPAQSYAGPGDVPCDVCTGRKFKAVKSCLTCLASYCETHVKPHYEGAAFKR
HKLINAIGNLEQKLCAEHQKVLEVFCRTDQTCICMLCTQDEHRSHDTVSAKKERSGKQKQ
LGETQTEIQQRIQERLKEIEELKQAVESLKRSACIEIKEREKIFTELIRSIEKIHTEVIE
LIGANEKAAVNQAEGRMKKLEQEIAELRRRNAELKQLSETEDHIHFLQNFQSLCAPPEAG
DLPSVIVNTEISFVAVRKAISELKDHIEDFCKRELITKTGWCEIVSFAGRNEQGGGSRKE
RAWRSEQGA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaaagtatggtcagaggatcagtttagctgttcagtgtgtctggagctattg
aaggacccagtcgctattccatgtggacacagttactgtatgggctgcccccagtgcaga
gagacctttaccccaaggcctgttctgcgcagaaacaccatgctggctgaagttgtggag
aaattaaagaagacacgactcaatcctcctcctgctcaaagttatgctggacctggagat
gtgccgtgtgatgtctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgc
ctggcctcttactgtgaaacacacgtcaagccacactatgagggggctgctttcaagagg
cacaagctgatcaatgcaattggaaatctggagcagaagctttgtgctgaacaccaaaag
gttttggaggtcttctgtagaaccgatcagacgtgtatttgcatgttgtgtacacaagat
gaacacaggagccatgatacagtctcagctaagaaagaaaggagtgggaaacagaagcag
ctgggagagacacagacagaaatacaacagagaatccaggagagactgaaagaaattgaa
gagctgaaacaggctgtggagtcactgaaaagatctgcatgcatagaaataaaggaacgt
gagaagatctttactgagctgatccgatccattgagaagatccacactgaggttattgag
ctgattggagctaacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactg
gagcaggagattgctgagctaaggaggagaaacgctgagctgaaacagctttcagagaca
gaggatcacatccattttctgcagaatttccagtctctctgtgcccctcctgaagctgga
gacttacccagcgttattgtcaatacagaaatctcttttgtggctgtgaggaaagctata
tctgaacttaaagatcatattgaggacttctgcaagagggaattaataaccaaaacaggt
tggtgtgaaatagtttcctttgcagggaggaatgagcagggaggaggaagcaggaaggag
agagcatggaggagtgagcaaggagcatga
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