Acipenser ruthenus (sterlet): 117965734
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Entry
117965734 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117965734
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117965734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
Prok-RING_4
zf-RING_6
DivIC
DUF5764
Motif
Other DBs
NCBI-GeneID:
117965734
NCBI-ProteinID:
XP_034766678
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Position
35:5475914..5604739
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AA seq
680 aa
AA seq
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MDTGASAPDPSKEKCEEEMKKQPAPRRKRRRRNSSEEGHPITKEKCEEEMKKQPEPRRKR
RRRNSSEEGHPDSKEKCEEEMKQPAPRRRLSNEMEHPNMSGCEASAEEETGETEKQEPAR
TAEGNILVAHDQFSCTVCLEVLKDPVTIPCGHSYCMGCIKNCWDETDHTGVYSCPQCRET
FTPRPDLRRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLA
SYCETHIKPHYEGAAFKRHKLVNAIGDLEQKLCAEHQKVLEVFCRTDQTCICLLCTHDEH
KSHDTVSAKKERSVKQKKLGETQTEIQQRIQERLKEVEELKQAVESLKRSACIEIKESEK
IFTELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNAELKQLSETED
HIHFLQNFQSLCAPPEAGDLPSVTVNTDISFGAVRKAVSELKDHIEDFCKGELVKITTTV
NEVAVYSLQAPEPRNRAEFLKYSCQLTLDPNTAYRELCLSEGNRKVTWRRETQRYPDHSE
RFDSCPQVLCREGLSGTRCYWEIEWSGGGASIGVTYKGISRKGGDHSCLLGFNDKSWSLF
CSGSSYTAWHNNNETAITAXPPPSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEP
LYPGFWLHCYDSSVTICQLN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagcctcagcgccggatccgtcaaaggaaaagtgtgaagaggaaatgaag
aaacagccagcgcctcgacgaaaacgaagacgaagaaacagtagtgaggaaggccatcct
atcacaaaggaaaagtgtgaagaggaaatgaagaaacagccagagcctcgacgaaaacga
agacgaagaaacagtagtgaggaaggccatcctgactcaaaggaaaagtgtgaagaggaa
atgaaacagccagctcctcgacgaagactcagtaatgagatggagcatcctaacatgtct
ggatgtgaagcgagtgcagaagaggaaacaggagagacagagaaacaagaaccagcaaga
acagcagaagggaatattctggtagcgcatgaccagtttagctgtacagtgtgtctggag
gtactgaaggacccagtcactattccatgtggacacagttactgtatggggtgtattaag
aactgctgggatgagacagatcatacaggtgtctacagctgcccccagtgcagagagacc
tttaccccaaggcctgatctgcgcagaaacaccatgctggctgaagttgtggagaaatta
aagaagacaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacatcaagccacactatgagggggctgctttcaagaggcacaag
ctggtcaatgcaattggagatctggagcagaagctttgtgctgaacaccaaaaggttttg
gaggtcttctgtagaacagatcagacgtgtatttgcttgttgtgtacacatgatgaacac
aagagccatgatacagtctcagcgaagaaagaaaggagtgtgaaacagaagaagctggga
gagacacagacagaaatacaacagagaatccaggagagactgaaagaagtggaggagttg
aaacaggctgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaag
atctttactgagctgatccgatccattgagaagatccacactgaggttattgagctgatt
ggagctaacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcag
gagattgctgagctaaggaggagaaacgctgagctgaaacagctttcagagacagaggat
cacatccattttctacagaatttccagtctctctgtgcccctcctgaagctggagactta
cccagcgttactgtcaatacagacatctcttttggggctgtgaggaaagctgtatctgaa
cttaaagaccatattgaggacttctgcaagggggaattagtcaaaataaccacaacagtg
aatgaagttgcagtttacagtctgcaggctccagagccaaggaacagagctgagttttta
aaatattcctgtcagctcacactggaccccaacacagcgtatagagagctctgtctgtct
gaagggaacagaaaggtgacatggaggagagagacccagagatatcctgatcactcagag
agatttgatagctgtccccaagtgctttgcagagagggtttgtctgggactcgctgttac
tgggagattgagtggagtgggggaggggcttctataggagtcacatataaaggaatcagc
aggaaaggaggggatcattcctgtctccttggattcaatgacaagtcctggagtttgttc
tgctctggttccagttacactgcctggcacaataacaatgaaactgcaataactgcataa
ccccccccctcccccagaataggagtgtatctggactttaatgccggcacgctgtccttt
tatggcgtctctgacacaatgaccctcctgcacagattccaaaccacattcactgagccg
ctctatcctgggttttggcttcattgttatgattcctctgtaacaatctgccagctgaac
tag
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