Acipenser ruthenus (sterlet): 117965742
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Entry
117965742 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117965742
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117965742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_6
zf-RING_5
Prok-RING_4
Nis1
DUF5764
PI3K_P85_iSH2
DivIC
Motif
Other DBs
NCBI-GeneID:
117965742
NCBI-ProteinID:
XP_034766719
LinkDB
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Position
35:complement(5064595..5072979)
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AA seq
556 aa
AA seq
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MASNLWSEDQFSCSVCLELLKDPVAIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRETFT
PRPVLGRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLASY
CETHVKPHYEGAAFKRHKLINAIGDLEQKLCAEHQKVLEVFCRTDQTCICLLCADEDHKS
HDTVSAEKERTGKQKQLGNTQTEIQQRIQERLKEIEELKQAVESLKRSACIEIKESEKIF
TELIRTIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNTELKQLSETEDHI
HFLQNFQSLCAPPEAGDLPSVTVNTDISLGAVRKAVSELKDHIVDFCKGELVKITTTVNE
VAVYSLQAPEPRNRAEFLKYSCQLTLDPNTAHRNLCLSEGNRKVTRRRETQRYPHHPERF
DSQPQVLCREGLSGTRCYWEIERSGVGASIGVTYKGISRKGEDDSCLLGFNDKSWSLSCS
GSSYTAWHNNNQTEITAPRSPRIGVYLDFNAGTLSFYGVSDTMTLLHRFQTTFTEPLYPG
FVLHYSDSSVTICQLN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacttgtggtcagaggatcagtttagctgttcagtgtgtctggagctattg
aaggacccagtcgctattccatgtggacacagttactgtatggggtgtattaagaactgc
tgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacctttacc
ccaaggcctgttctgggcagaaacaccatgctggctgaagttgtggagaaattaaagaag
acaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccgtgtgat
ttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcctcttac
tgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaagctgatc
aatgcaattggagatctggagcagaagctttgtgctgaacaccagaaggttttggaggtc
ttctgtagaaccgatcagacgtgtatttgcttgttgtgtgcagacgaggatcacaagagc
catgatacagtctcagctgagaaagaaaggactgggaaacagaagcagctgggaaacaca
cagacagaaatacaacagagaatccaggagagactgaaagaaattgaggagttgaaacag
gctgtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatcttt
actgagctgatccgaaccattgagaagatccacactgaggttattgagctgattggagct
aacgagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggagatt
gctgagctaaggaggagaaacactgagctgaaacagctttcagagacagaggatcacatc
cattttctacagaatttccagtctctctgtgcccctcctgaagctggagacttacccagc
gttactgtcaatacagacatctctcttggggctgtgaggaaagctgtatctgaacttaaa
gaccatattgtggacttctgcaagggggaattagtcaaaataaccacaacagtgaatgaa
gttgcagtttacagtctgcaggctccagagccaaggaacagagctgagtttttaaaatat
tcctgtcagctcacactggaccccaacacagcgcatagaaacctctgtctgtctgaaggg
aacagaaaggtgacacggaggagagagacccagagatatcctcatcacccagagagattt
gatagccagccccaagtgctttgcagagagggtttgtctgggactcgctgttactgggag
attgagaggagtggtgtaggggcttctataggagtcacatataaaggaatcagcaggaaa
ggagaggatgattcctgtctccttggattcaatgacaagtcctggagtttgtcctgctct
ggttccagttacactgcctggcacaataacaatcaaactgaaataactgccccccgctcc
cccagaataggagtgtatctggactttaatgccggcacgctgtccttttatggcgtctct
gacacaatgaccctcctgcacagattccaaaccacattcactgagccgctctatcctggg
tttgtgcttcattattctgattcctctgtaacaatctgccagctgaactag
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