Acipenser ruthenus (sterlet): 117965763
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Entry
117965763 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117965763
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117965763
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_6
Prok-RING_4
zf-RING_5
DUF5764
DivIC
CdvA
TMF_TATA_bd
DUF6158
CCDC92
DUF4618
Motif
Other DBs
NCBI-GeneID:
117965763
NCBI-ProteinID:
XP_034766794
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All DBs
Position
35:7116273..7119951
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AA seq
293 aa
AA seq
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MAEANILVAHDQFSCSVCLEILKDPVTIPCGHSYCMGCIKNCWDQTDHTGVYSCPQCRET
FTPRPVLCRNTMLAEVVEKLKKTGLNPPPAQSYAGPGDVPCDFCTGRKFKAVKSCLTCLA
SYCETHVKPHYEGAAFKRHKLINAIGNLEQKLCAEHQKVLEVFCRTDQTCICWLCADKEH
KSHDTVSAEAERTKQLGETQTEIQQRIQERLKEIEELKQAVESLKRSACIEIKESEKIFT
ELIRSIEKIHTEVIELIGANEKAAVNQAEGRMKKLEQEIAELRRRNAELKQLS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattctggtagcgcatgaccagtttagctgttcagtgtgtctggag
atattgaaggacccagtcactattccatgtggacacagttactgtatggggtgtattaag
aactgctgggatcagactgatcatacaggtgtctacagctgcccccagtgcagagagacc
tttaccccaaggcctgttctgtgcagaaacaccatgctggctgaagttgtggagaaatta
aagaagacaggactcaatcctcctcctgctcaaagttatgctggacctggagatgtgccg
tgtgatttctgcactgggagaaagttcaaagctgtgaaatcctgtttgacgtgcctggcc
tcttactgtgaaacacacgtcaagccacactatgagggggctgctttcaagaggcacaag
ctgatcaatgcaattggaaatctggagcagaagctttgtgctgaacaccaaaaggttttg
gaggtcttctgtagaaccgatcagacgtgtatttgctggttgtgtgcagacaaggaacac
aagagccatgatacagtctcagctgaggcagaaaggactaagcagctgggagagacacag
acagaaatacaacagagaatccaggagagactgaaagaaattgaggagctgaaacaggct
gtggagtcactgaaaagatctgcatgcatagaaataaaggaaagtgagaagatctttact
gagctgatccgatccattgagaagatccacactgaggttattgagctgattggagctaac
gagaaggctgcagtgaatcaggctgaaggacgcatgaagaaactggagcaggagattgct
gagctaaggaggagaaacgctgagctgaaacagctttca
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